6ZW5 | pdb_00006zw5

C15 symmetry: Bacterial Vipp1 and PspA are members of the ancient ESCRT-III membrane-remodeling superfamily.

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Trypsin	e6zw5A1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
AC [auth BC]	Trypsin	e6zw5BC1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
BB [auth CB]	Glyco_transf_41	e6zw5CB1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
DA [auth EA]	Glyco_transf_41	e6zw5EA1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
EA [auth FA]	Trypsin	e6zw5FA1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
F	Glyco_transf_41	e6zw5F1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
FC [auth GC]	Glyco_transf_41	e6zw5GC1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
GC [auth HC]	Trypsin	e6zw5HC1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
HB [auth IB]	Glyco_transf_41	e6zw5IB1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
JA [auth KA]	Glyco_transf_41	e6zw5KA1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
KA [auth LA]	Trypsin	e6zw5LA1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
LC [auth MC]	Glyco_transf_41	e6zw5MC1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
NB [auth OB]	Glyco_transf_41	e6zw5OB1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
OB [auth PB]	Trypsin	e6zw5PB1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
PA [auth QA]	Glyco_transf_41	e6zw5QA1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
QA [auth RA]	Trypsin	e6zw5RA1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
R	Glyco_transf_41	e6zw5R1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
S	Trypsin	e6zw5S1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
TB [auth UB]	Glyco_transf_41	e6zw5UB1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
UB [auth VB]	Trypsin	e6zw5VB1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
VA [auth WA]	Glyco_transf_41	e6zw5WA1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
WA [auth XA]	Trypsin	e6zw5XA1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
X [auth Y]	Glyco_transf_41	e6zw5Y1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
Y [auth Z]	Trypsin	e6zw5Z1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
ZB [auth AC]	Glyco_transf_41	e6zw5AC1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
M	Trypsin	e6zw5M1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
L	Glyco_transf_41	e6zw5L1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
IB [auth JB]	Trypsin	e6zw5JB1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
G	Trypsin	e6zw5G1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
CB [auth DB]	Trypsin	e6zw5DB1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, AA [auth BA], AB [auth BB], AC [auth BC], B, A, AA [auth BA], AB [auth BB], AC [auth BC], B, BA [auth CA], BB [auth CB], BC [auth CC], C, CA [auth DA], CB [auth DB], CC [auth DC], D, DA [auth EA], DB [auth EB], DC [auth EC], E, EA [auth FA], EB [auth FB], EC [auth FC], F, FA [auth GA], FB [auth GB], FC [auth GC], G, GA [auth HA], GB [auth HB], GC [auth HC], H, HA [auth IA], HB [auth IB], HC [auth IC], I, IA [auth JA], IB [auth JB], IC [auth JC], J, JA [auth KA], JB [auth KB], JC [auth KC], K, KA [auth LA], KB [auth LB], KC [auth LC], L, LA [auth MA], LB [auth MB], LC [auth MC], M, MA [auth NA], MB [auth NB], N, NA [auth OA], NB [auth OB], O, OA [auth PA], OB [auth PB], P, PA [auth QA], PB [auth QB], Q, QA [auth RA], QB [auth RB], R, RA [auth SA], RB [auth SB], S, SA [auth TA], SB [auth TB], T, TA [auth UA], TB [auth UB], U [auth V], UA [auth VA], UB [auth VB], V [auth W], VA [auth WA], VB [auth WB], W [auth X], WA [auth XA], WB [auth XB], X [auth Y], XA [auth YA], XB [auth YB], Y [auth Z], YA [auth ZA], YB [auth ZB], Z [auth AA], ZA [auth AB], ZB [auth AC]	PF04012	PspA/IM30 family (PspA_IM30)	PspA/IM30 family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth BA], AB [auth BB], AC [auth BC], B, A, AA [auth BA], AB [auth BB], AC [auth BC], B, BA [auth CA], BB [auth CB], BC [auth CC], C, CA [auth DA], CB [auth DB], CC [auth DC], D, DA [auth EA], DB [auth EB], DC [auth EC], E, EA [auth FA], EB [auth FB], EC [auth FC], F, FA [auth GA], FB [auth GB], FC [auth GC], G, GA [auth HA], GB [auth HB], GC [auth HC], H, HA [auth IA], HB [auth IB], HC [auth IC], I, IA [auth JA], IB [auth JB], IC [auth JC], J, JA [auth KA], JB [auth KB], JC [auth KC], K, KA [auth LA], KB [auth LB], KC [auth LC], L, LA [auth MA], LB [auth MB], LC [auth MC], M, MA [auth NA], MB [auth NB], N, NA [auth OA], NB [auth OB], O, OA [auth PA], OB [auth PB], P, PA [auth QA], PB [auth QB], Q, QA [auth RA], QB [auth RB], R, RA [auth SA], RB [auth SB], S, SA [auth TA], SB [auth TB], T, TA [auth UA], TB [auth UB], U [auth V], UA [auth VA], UB [auth VB], V [auth W], VA [auth WA], VB [auth WB], W [auth X], WA [auth XA], WB [auth XB], X [auth Y], XA [auth YA], XB [auth YB], Y [auth Z], YA [auth ZA], YB [auth ZB], Z [auth AA], ZA [auth AB], ZB [auth AC]	vipp1	binding lipid binding	-	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth BA], AB [auth BB], AC [auth BC], B, A, AA [auth BA], AB [auth BB], AC [auth BC], B, BA [auth CA], BB [auth CB], BC [auth CC], C, CA [auth DA], CB [auth DB], CC [auth DC], D, DA [auth EA], DB [auth EB], DC [auth EC], E, EA [auth FA], EB [auth FB], EC [auth FC], F, FA [auth GA], FB [auth GB], FC [auth GC], G, GA [auth HA], GB [auth HB], GC [auth HC], H, HA [auth IA], HB [auth IB], HC [auth IC], I, IA [auth JA], IB [auth JB], IC [auth JC], J, JA [auth KA], JB [auth KB], JC [auth KC], K, KA [auth LA], KB [auth LB], KC [auth LC], L, LA [auth MA], LB [auth MB], LC [auth MC], M, MA [auth NA], MB [auth NB], N, NA [auth OA], NB [auth OB], O, OA [auth PA], OB [auth PB], P, PA [auth QA], PB [auth QB], Q, QA [auth RA], QB [auth RB], R, RA [auth SA], RB [auth SB], S, SA [auth TA], SB [auth TB], T, TA [auth UA], TB [auth UB], U [auth V], UA [auth VA], UB [auth VB], V [auth W], VA [auth WA], VB [auth WB], W [auth X], WA [auth XA], WB [auth XB], X [auth Y], XA [auth YA], XB [auth YB], Y [auth Z], YA [auth ZA], YB [auth ZB], Z [auth AA], ZA [auth AB], ZB [auth AC]	IPR007157	PspA/VIPP1	Family