Cryo-EM Structure of T. kodakarensis 70S ribosome
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| I [auth Ai] | SCOP2B Superfamily | Ribosomal protein S7 | 8099620 | 3000799 | SCOP2B (2022-06-29) |
| H [auth Ah] | SCOP2B Superfamily | GS N-terminal domain-like | 8099616 | 3000408 | SCOP2B (2022-06-29) |
| KB [auth Bl] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8099626 | 3001320 | SCOP2B (2022-06-29) |
| HB [auth Bi] | SCOP2B Superfamily | Ribosomal protein L39e | 8099644 | 3001756 | SCOP2B (2022-06-29) |
| GB [auth Bh] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8099650 | 3001320 | SCOP2B (2022-06-29) |
| FB [auth Bg] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8099618 | 3001320 | SCOP2B (2022-06-29) |
| EB [auth Be] | SCOP2B Superfamily | Ribosomal protein L34e-like | 8099668 | 3002203 | SCOP2B (2022-06-29) |
| DB [auth Bd] | SCOP2B Superfamily | Ribosomal protein L32e | 8099680 | 3000982 | SCOP2B (2022-06-29) |
| CB [auth Bc] | SCOP2B Superfamily | Ribosomal protein L31e | 8099642 | 3000699 | SCOP2B (2022-06-29) |
| BB [auth Bb] | SCOP2B Superfamily | L30e-like | 8099622 | 3001739 | SCOP2B (2022-06-29) |
| AB [auth Ba] | SCOP2 Family | Ribosomal protein L30p/L7e | 8099685 | 4001360 | SCOP2 (2022-06-29) |
| AB [auth Ba] | SCOP2 Superfamily | Ribosomal protein L30p/L7e | 8099686 | 3001378 | SCOP2 (2022-06-29) |
| ZA [auth BZ] | SCOP2B Superfamily | Ribosomal protein L29 (L29p) | 8099608 | 3000713 | SCOP2B (2022-06-29) |
| XA [auth BX] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8099672 | 3000334 | SCOP2B (2022-06-29) |
| WA [auth BW] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8099604 | 3000210 | SCOP2B (2022-06-29) |
| VA [auth BV] | SCOP2B Superfamily | Ribosomal protein L22 | 8099606 | 3001078 | SCOP2B (2022-06-29) |
| UA [auth BU] | SCOP2 Family | Ribosomal proteins L24p and L21e | 8099647 | 4001752 | SCOP2 (2022-06-29) |
| UA [auth BU] | SCOP2 Superfamily | Translation proteins SH3-like KOW motif containing domain | 8099648 | 3000334 | SCOP2 (2022-06-29) |
| TA [auth BT] | SCOP2B Superfamily | RplX-like | 8099640 | 3000673 | SCOP2B (2022-06-29) |
| SA [auth BS] | SCOP2B Superfamily | Ribosomal protein L19 (L19e) | 8099682 | 3000890 | SCOP2B (2022-06-29) |
| RA [auth BR] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8099664 | 3001045 | SCOP2B (2022-06-29) |
| QA [auth BQ] | SCOP2 Family | Ribosomal protein L5e and archael L18-like | 8099683 | 4006591 | SCOP2 (2022-06-29) |
| QA [auth BQ] | SCOP2 Superfamily | Translational machinery components | 8099684 | 3000571 | SCOP2 (2022-06-29) |
| PA [auth BP] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8099646 | 3000210 | SCOP2B (2022-06-29) |
| D [auth Ad] | SCOP2B Superfamily | Ribosomal S3Ae-like | 8099632 | 3002166 | SCOP2B (2022-06-29) |
| OA [auth BO] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8099688 | 3001045 | SCOP2B (2022-06-29) |
| NA [auth BN] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8099658 | 3000334 | SCOP2B (2022-06-29) |
| MA [auth BM] | SCOP2 Family | Ribosomal protein L14e | 8099657 | 4001669 | SCOP2 (2022-06-29) |
| MA [auth BM] | SCOP2 Superfamily | Translation proteins SH3-like KOW motif containing domain | 8099658 | 3000334 | SCOP2 (2022-06-29) |
| LA [auth BL] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8099670 | 3000433 | SCOP2B (2022-06-29) |
| KA [auth BK] | SCOP2B Superfamily | Ribosomal protein L13 | 8099666 | 3001134 | SCOP2B (2022-06-29) |
| JA [auth BJ] | SCOP2B Superfamily | Ribosomal protein L16p/L10e | 8099612 | 3000884 | SCOP2B (2022-06-29) |
| IA [auth BI] | SCOP2B Superfamily | L30e-like | 8099636 | 3001739 | SCOP2B (2022-06-29) |
| HA [auth BH] | SCOP2B Superfamily | L30e-like | 8099636 | 3001739 | SCOP2B (2022-06-29) |
| FA [auth BF] | SCOP2 Family | Ribosomal protein L5 | 8099673 | 4001498 | SCOP2 (2022-06-29) |
| FA [auth BF] | SCOP2 Superfamily | RL5-like | 8099674 | 3001709 | SCOP2 (2022-06-29) |
| EA [auth BE] | SCOP2B Superfamily | Ribosomal protein L4 | 8099610 | 3001146 | SCOP2B (2022-06-29) |
| DA [auth BD] | SCOP2B Superfamily | Translational proteins | 8099614 | 3000811 | SCOP2B (2022-06-29) |
| Y [auth Ay] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8099638 | 3000135 | SCOP2B (2022-06-29) |
| X [auth Ax] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8099624 | 3001320 | SCOP2B (2022-06-29) |
| W [auth Aw] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8099652 | 3000210 | SCOP2B (2022-06-29) |
| V [auth Av] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8099634 | 3000034 | SCOP2B (2022-06-29) |
| T [auth At] | SCOP2B Superfamily | Rps17e-like | 8099602 | 3001852 | SCOP2B (2022-06-29) |
| B [auth Ab] | SCOP2 Family | Ribosomal protein S2-like | 8099653 | 4003744 | SCOP2 (2022-06-29) |
| B [auth Ab] | SCOP2 Superfamily | SIS domain/Ribosomal protein S2-like | 8099654 | 3001397 | SCOP2 (2022-06-29) |
| R [auth Ar] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8099676 | 3000068 | SCOP2B (2022-06-29) |
| P [auth Ap] | SCOP2B Superfamily | S13-like H2TH domain | 8099660 | 3000053 | SCOP2B (2022-06-29) |
| N [auth An] | SCOP2B Superfamily | Translational machinery components | 8099662 | 3000571 | SCOP2B (2022-06-29) |
| M [auth Am] | SCOP2B Superfamily | Ribosomal protein S10 | 8099628 | 3001336 | SCOP2B (2022-06-29) |
| L [auth Al] | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8099656 | 3000100 | SCOP2B (2022-06-29) |
| K [auth Ak] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8099630 | 3000433 | SCOP2B (2022-06-29) |
| J [auth Aj] | SCOP2 Family | Ribosomal protein S8 | 8099677 | 4002027 | SCOP2 (2022-06-29) |
| J [auth Aj] | SCOP2 Superfamily | Ribosomal protein S8 | 8099678 | 3000709 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| I [auth Ai] | CSD | e6skfAi1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| H [auth Ah] | CSD | e6skfAh1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| G [auth Ag] | E6 | e6skfAg01 | A: alpha bundles | X: Rossmann-like | H: all-alpha NTP pyrophosphatases | T: Hypothetical protein AF_0060 | F: E6 | ECOD (develop294) |
| KB [auth Bl] | CSD | e6skfBl1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| JB [auth Bk] | CSD | e6skfBk1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| F [auth Af] | Glyco_hydro_42 | e6skfAf1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Glyco_hydro_42 | ECOD (develop294) |
| IB [auth Bj] | CSD | e6skfBj1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| HB [auth Bi] | CSD | e6skfBi1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| GB [auth Bh] | CSD | e6skfBh1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| FB [auth Bg] | CSD | e6skfBg1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| EB [auth Be] | CSD | e6skfBe1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| DB [auth Bd] | CSD | e6skfBd1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| CB [auth Bc] | CSD | e6skfBc1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| BB [auth Bb] | CSD | e6skfBb1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| AB [auth Ba] | CSD | e6skfBa1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| ZA [auth BZ] | CSD | e6skfBZ1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| E [auth Ae] | CSD | e6skfAe1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| YA [auth BY] | CSD | e6skfBY1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| XA [auth BX] | CSD | e6skfBX1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| WA [auth BW] | CSD | e6skfBW1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| VA [auth BV] | CSD | e6skfBV1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| UA [auth BU] | CSD | e6skfBU1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| TA [auth BT] | CSD | e6skfBT1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| SA [auth BS] | CSD | e6skfBS1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| RA [auth BR] | CSD | e6skfBR1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| QA [auth BQ] | CSD | e6skfBQ1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| PA [auth BP] | CSD | e6skfBP1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| D [auth Ad] | CSD | e6skfAd1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| OA [auth BO] | CSD | e6skfBO1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| NA [auth BN] | Glyco_hydro_42 | e6skfBN1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Glyco_hydro_42 | ECOD (develop294) |
| MA [auth BM] | CSD | e6skfBM1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| LA [auth BL] | CSD | e6skfBL1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| KA [auth BK] | CSD | e6skfBK1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| JA [auth BJ] | CSD | e6skfBJ1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| IA [auth BI] | Glyco_hydro_42 | e6skfBI1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Glyco_hydro_42 | ECOD (develop294) |
| HA [auth BH] | CSD | e6skfBH1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| GA [auth BG] | CSD | e6skfBG1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| FA [auth BF] | CSD | e6skfBF1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| EA [auth BE] | CSD | e6skfBE1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| DA [auth BD] | CSD | e6skfBD1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| C [auth Ac] | CSD | e6skfAc1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| CA [auth BC] | CSD | e6skfBC1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| Z [auth Az] | CSD | e6skfAz1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| Y [auth Ay] | CSD | e6skfAy1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| X [auth Ax] | CSD | e6skfAx1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| W [auth Aw] | CSD | e6skfAw1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| V [auth Av] | CSD | e6skfAv1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| U [auth Au] | CSD | e6skfAu1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| T [auth At] | CSD | e6skfAt1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| B [auth Ab] | CSD | e6skfAb1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| S [auth As] | CSD | e6skfAs1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| R [auth Ar] | CSD | e6skfAr1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| Q [auth Aq] | CSD | e6skfAq1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| P [auth Ap] | CSD | e6skfAp1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| O [auth Ao] | CSD | e6skfAo1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| N [auth An] | CSD | e6skfAn1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| M [auth Am] | CSD | e6skfAm1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| L [auth Al] | CSD | e6skfAl1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| K [auth Ak] | CSD | e6skfAk1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
| J [auth Aj] | CSD | e6skfAj1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: CSD | ECOD (develop294) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| ZA [auth BZ] | PF00831 | Ribosomal L29 protein (Ribosomal_L29) | Ribosomal L29 protein | - | Family |
| YA [auth BY] | PF01246 | Ribosomal protein L24e (Ribosomal_L24e) | Ribosomal protein L24e | Domain | |
| XA [auth BX] | PF16906 | Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26) | Ribosomal proteins L26 eukaryotic, L24P archaeal | - | Family |
| XA [auth BX] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| WA [auth BW] | PF00276 | Ribosomal protein L23 (Ribosomal_L23) | Ribosomal protein L23 | - | Family |
| VA [auth BV] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
| UA [auth BU] | PF01157 | Ribosomal protein L21e (Ribosomal_L21e) | Ribosomal protein L21e | - | Family |
| TA [auth BT] | PF01775 | Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A) | Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A | This family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. | Domain |
| SA [auth BS] | PF01280 | Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e) | Ribosomal protein L19e, N-terminal domain | This domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. | Domain |
| SA [auth BS] | PF25476 | Ribosomal protein L19e, C-terminal domain (Ribosomal_L19e_C) | Ribosomal protein L19e, C-terminal domain | This domain is found at the C-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. | Domain |
| RA [auth BR] | PF17135 | Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18) | Ribosomal protein 60S L18 and 50S L18e | - | Family |
| QA [auth BQ] | PF17144 | Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e) | Ribosomal large subunit proteins 60S L5, and 50S L18 | - | Family |
| PA [auth BP] | PF00827 | Ribosomal L15 (Ribosomal_L15e) | Ribosomal L15 | - | Family |
| OA [auth BO] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. | Domain |
| LA [auth BL] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | Domain | |
| LA [auth BL] | PF00935 | Ribosomal protein L44 (Ribosomal_L44) | Ribosomal protein L44 | - | Family |
| KA [auth BK] | PF00572 | Ribosomal protein L13 (Ribosomal_L13) | Ribosomal protein L13 | - | Family |
| JA [auth BJ] | PF00252 | Ribosomal protein L16p/L10e (Ribosomal_L16) | Ribosomal protein L16p/L10e | Domain | |
| HA [auth BH], IA [auth BI] | PF00832 | Ribosomal L39 protein (Ribosomal_L39) | Ribosomal L39 protein | - | Family |
| HA [auth BH], IA [auth BI] | PF01907 | Ribosomal protein L37e (Ribosomal_L37e) | Ribosomal protein L37e | - | Family |
| HA [auth BH], IA [auth BI] | PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |
| GA [auth BG] | PF00347 | Ribosomal protein L6 (Ribosomal_L6) | Ribosomal protein L6 | Domain | |
| GA [auth BG] | PF01780 | Ribosomal L37ae protein family (Ribosomal_L37ae) | Ribosomal L37ae protein family | - | Family |
| FA [auth BF] | PF00281 | Ribosomal protein L5 (Ribosomal_L5) | Ribosomal protein L5 | Domain | |
| FA [auth BF] | PF00673 | ribosomal L5P family C-terminus (Ribosomal_L5_C) | ribosomal L5P family C-terminus | This region is found associated with Pfam:PF00281. | Domain |
| EA [auth BE] | PF00573 | Ribosomal protein L4/L1 family (Ribosomal_L4) | Ribosomal protein L4/L1 family | - | Family |
| EA [auth BE] | PF01199 | Ribosomal protein L34e (Ribosomal_L34e) | Ribosomal protein L34e | - | Family |
| DA [auth BD] | PF01655 | Ribosomal protein L32 (Ribosomal_L32e) | Ribosomal protein L32 | - | Family |
| CA [auth BC] | PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | Domain | |
| CA [auth BC] | PF00181 | Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N) | Ribosomal Proteins L2, RNA binding N-terminal domain | Domain | |
| CA [auth BC] | PF01198 | Ribosomal protein L31e (Ribosomal_L31e) | Ribosomal protein L31e | - | Family |
| BA [auth BB] | PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |
| AA [auth BA] | PF00327 | Ribosomal protein L30p/L7e (Ribosomal_L30) | Ribosomal protein L30p/L7e | This family includes prokaryotic L30 and eukaryotic L7. | Domain |














