7A28 | pdb_00007a28

Crystal structure of T. brucei PDE-B1 catalytic domain with inhibitor NPD-617

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyHD-domain/PDEase-like 8067459 3000943 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyHD-domain/PDEase-like 8067459 3000943 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BAbhydrolase_1e7a28B1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (develop294)
ALyase_8_Ce7a28A1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Lyase_8_CECOD (develop294)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Phosphodiesterase

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR003607HD/PDEase domainDomain
A, B
IPR0020733'5'-cyclic nucleotide phosphodiesterase, catalytic domainDomain
A, B
IPR0369713'5'-cyclic nucleotide phosphodiesterase, catalytic domain superfamilyHomologous Superfamily
A, B
IPR003018GAF domainDomain
A, B
IPR029016GAF-like domain superfamilyHomologous Superfamily
A, B
IPR0230883'5'-cyclic nucleotide phosphodiesteraseFamily
A, B
IPR0231743'5'-cyclic nucleotide phosphodiesterase, conserved siteConserved Site