Leishmania Major mitochondrial ribosome
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| IC [auth BI] | SCOP2B Superfamily | Cyclophilin-like | 8103168 | 3000168 | SCOP2B (2022-06-29) |
| VC [auth BH] | SCOP2B Superfamily | Cyclophilin-like | 8103170 | 3000168 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| PA [auth x] | Helicase_C | e7anex01 | A: beta barrels | X: Histone-like | H: all-alpha NTP pyrophosphatases | T: Hypothetical protein AF_0060 | F: Helicase_C | ECOD (v294.2) |
| GB [auth F] | Glyco_hydro_108,PG_binding_3 | e7aneF1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: Glyco_hydro_108,PG_binding_3 | ECOD (v294.2) |
| IB [auth H] | Glyco_hydro_108,PG_binding_3 | e7aneH1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: Glyco_hydro_108,PG_binding_3 | ECOD (v294.2) |
| NC [auth Ai] | Glyco_hydro_108,PG_binding_3 | e7aneAi1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: Glyco_hydro_108,PG_binding_3 | ECOD (v294.2) |
| IC [auth BI] | Glyco_hydro_108,PG_binding_3 | e7aneBI1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: Glyco_hydro_108,PG_binding_3 | ECOD (v294.2) |
| BC [auth BA] | Glyco_hydro_108,PG_binding_3 | e7aneBA1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: Glyco_hydro_108,PG_binding_3 | ECOD (v294.2) |
| XB [auth W] | Glyco_hydro_108,PG_binding_3 | e7aneW1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: Glyco_hydro_108,PG_binding_3 | ECOD (v294.2) |
| VB [auth U] | Glyco_hydro_108,PG_binding_3 | e7aneU1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: Glyco_hydro_108,PG_binding_3 | ECOD (v294.2) |
| UB [auth T] | e7aneT1 | A: beta barrels | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: | ECOD (v294.2) | |
| RB [auth Q] | e7aneQ1 | A: beta barrels | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: | ECOD (v294.2) | |
| G [auth au] | Helicase_C | e7aneau01 | A: beta barrels | X: Histone-like | H: all-alpha NTP pyrophosphatases | T: Hypothetical protein AF_0060 | F: Helicase_C | ECOD (v294.2) |
| OB [auth N] | Helicase_C | e7aneN01 | A: beta barrels | X: Histone-like | H: all-alpha NTP pyrophosphatases | T: Hypothetical protein AF_0060 | F: Helicase_C | ECOD (v294.2) |
| MB [auth L] | Helicase_C | e7aneL01 | A: beta barrels | X: Histone-like | H: all-alpha NTP pyrophosphatases | T: Hypothetical protein AF_0060 | F: Helicase_C | ECOD (v294.2) |
| LB [auth K] | Helicase_C | e7aneK01 | A: beta barrels | X: Histone-like | H: all-alpha NTP pyrophosphatases | T: Hypothetical protein AF_0060 | F: Helicase_C | ECOD (v294.2) |
| JB [auth I] | Helicase_C | e7aneI01 | A: beta barrels | X: Histone-like | H: all-alpha NTP pyrophosphatases | T: Hypothetical protein AF_0060 | F: Helicase_C | ECOD (v294.2) |
| HB [auth G] | Helicase_C | e7aneG01 | A: beta barrels | X: Histone-like | H: all-alpha NTP pyrophosphatases | T: Hypothetical protein AF_0060 | F: Helicase_C | ECOD (v294.2) |
| FB [auth E] | Helicase_C | e7aneE01 | A: beta barrels | X: Histone-like | H: all-alpha NTP pyrophosphatases | T: Hypothetical protein AF_0060 | F: Helicase_C | ECOD (v294.2) |
| BB [auth A] | Helicase_C | e7aneA01 | A: beta barrels | X: Histone-like | H: all-alpha NTP pyrophosphatases | T: Hypothetical protein AF_0060 | F: Helicase_C | ECOD (v294.2) |
| WA [auth b] | Glyco_hydro_108,PG_binding_3 | e7aneb1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: Glyco_hydro_108,PG_binding_3 | ECOD (v294.2) |
| UA [auth k] | Glyco_hydro_108,PG_binding_3 | e7anek1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: Glyco_hydro_108,PG_binding_3 | ECOD (v294.2) |
| MA [auth ar] | Helicase_C | e7anear01 | A: beta barrels | X: Histone-like | H: all-alpha NTP pyrophosphatases | T: Hypothetical protein AF_0060 | F: Helicase_C | ECOD (v294.2) |
| R [auth r] | Helicase_C | e7aner01 | A: beta barrels | X: Histone-like | H: all-alpha NTP pyrophosphatases | T: Hypothetical protein AF_0060 | F: Helicase_C | ECOD (v294.2) |
| M [auth aj] | Glyco_hydro_108,PG_binding_3 | e7aneaj1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: Glyco_hydro_108,PG_binding_3 | ECOD (v294.2) |
| PD [auth BG] | Glyco_hydro_108,PG_binding_3 | e7aneBG1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: Glyco_hydro_108,PG_binding_3 | ECOD (v294.2) |
| OD [auth BO] | Glyco_hydro_108,PG_binding_3 | e7aneBO1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: Glyco_hydro_108,PG_binding_3 | ECOD (v294.2) |
| HD [auth Ac] | Glyco_hydro_108,PG_binding_3 | e7aneAc1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: Glyco_hydro_108,PG_binding_3 | ECOD (v294.2) |
| FD [auth As] | Glyco_hydro_108,PG_binding_3 | e7aneAs1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: Glyco_hydro_108,PG_binding_3 | ECOD (v294.2) |
| BD [auth Ad] | V-set | e7aneAd1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: V-set | ECOD (v294.2) |
| ZC [auth Ak] | e7aneAk1 | A: beta barrels | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: | ECOD (v294.2) | |
| WC [auth Am] | Glyco_hydro_108,PG_binding_3 | e7aneAm1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: Glyco_hydro_108,PG_binding_3 | ECOD (v294.2) |
| VC [auth BH] | Glyco_hydro_108,PG_binding_3 | e7aneBH1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: Glyco_hydro_108,PG_binding_3 | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| GB [auth F] | PF00572 | Ribosomal protein L13 (Ribosomal_L13) | Ribosomal protein L13 | - | Family |
| IB [auth H] | PF00252 | Ribosomal protein L16p/L10e (Ribosomal_L16) | Ribosomal protein L16p/L10e | Domain | |
| ND [auth BL] | PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | Domain | |
| IC [auth BI] | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond pr ... | Domain |
| YB [auth X] | PF02777 | Iron/manganese superoxide dismutases, C-terminal domain (Sod_Fe_C) | Iron/manganese superoxide dismutases, C-terminal domain | superoxide dismutases (SODs) catalyse the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the Mn/Fe-binding family is one. In humans, there is a cytoplas ... | Domain |
| XB [auth W] | PF09597 | Small ribosomal subunit protein mS41 SAM domain (SAM_Ribosomal_mS41) | Small ribosomal subunit protein mS41 SAM domain | This entry represents a SAM-like domain found in fungal mitoribosome protein mS41. The mitochondrion-specific ribosomal protein mS41 family comprises proteins that are integral components of the mitochondrial ribosome, also known as the mitoribosome ... | Domain |
| SB [auth R] | PF06984 | Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47) | Mitochondrial 39-S ribosomal protein L47 (MRP-L47) | - | Family |
| SB [auth R] | PF10236 | Mitochondrial ribosomal death-associated protein 3 (DAP3) | Mitochondrial ribosomal death-associated protein 3 | - | Family |
| NB [auth M] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
| MB [auth L] | PF00829 | Ribosomal prokaryotic L21 protein (Ribosomal_L21p) | Ribosomal prokaryotic L21 protein | - | Family |
| LB [auth K] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | Domain | |
| JB [auth I] | PF01196 | Ribosomal protein L17 (Ribosomal_L17) | Ribosomal protein L17 | - | Family |
| HB [auth G] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. | Domain |
| FB [auth E] | PF03946 | Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N) | Ribosomal protein L11, N-terminal domain | The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. | Domain |
| FB [auth E] | PF00298 | Ribosomal protein L11, RNA binding domain (Ribosomal_L11) | Ribosomal protein L11, RNA binding domain | Domain | |
| DB [auth C] | PF01281 | Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N) | Ribosomal protein L9, N-terminal domain | Domain | |
| DB [auth C] | PF00410 | Ribosomal protein S8 (Ribosomal_S8) | Ribosomal protein S8 | Domain | |
| CB [auth B] | PF00573 | Ribosomal protein L4/L1 family (Ribosomal_L4) | Ribosomal protein L4/L1 family | - | Family |
| BB [auth A] | PF03719 | Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C) | Ribosomal protein S5, C-terminal domain | Domain | |
| BB [auth A] | PF00297 | Ribosomal protein L3 (Ribosomal_L3) | Ribosomal protein L3 | - | Family |
| BB [auth A] | PF00333 | Ribosomal protein S5, N-terminal domain (Ribosomal_S5) | Ribosomal protein S5, N-terminal domain | Domain | |
| OD [auth BO] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | Domain | |
| VC [auth BH] | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond pr ... | Domain |














