7CEC | pdb_00007cec

Structure of alpha6beta1 integrin in complex with laminin-511


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
IPsbYe7cecI1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: PsbYECOD (develop294)
HPsbYe7cecH1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: PsbYECOD (develop294)
GGlyco_hydro_108,PG_binding_3e7cecG1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Glyco_hydro_108,PG_binding_3ECOD (develop294)
Ce7cecC1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F:ECOD (develop294)
BGlyco_hydro_108,PG_binding_3e7cecB1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Glyco_hydro_108,PG_binding_3ECOD (develop294)
APsbYe7cecA1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: PsbYECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
H2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
Light ChainIGKV4 Kappaintegrin beta-1SAbDab (2026-03-20)
Heavy ChainIGHV8 -integrin beta-1SAbDab (2026-03-20)
Light ChainIGKV4 Kappaintegrin beta-1SAbDab (2026-03-20)
Heavy ChainIGHV5 -integrin beta-1SAbDab (2026-03-20)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF11629C terminal SARAH domain of Mst1 (Mst1_SARAH)C terminal SARAH domain of Mst1- Family
PF11629C terminal SARAH domain of Mst1 (Mst1_SARAH)C terminal SARAH domain of Mst1- Family
PF02210Laminin G domain (Laminin_G_2)Laminin G domainThis family includes the Thrombospondin N-terminal-like domain, a Laminin G subfamily. Domain
PF17205Integrin plexin domain (PSI_integrin)Integrin plexin domainThis short disulphide rich domain is found at the N-terminus of integrin beta chains. Domain
PF00362Integrin beta chain VWA domain (Integrin_beta)Integrin beta chain VWA domainIntegrins have been found in animals and their homologues have also been found in cyanobacteria, probably due to horizontal gene transfer [1]. This domain corresponds to the integrin beta VWA domain. Domain
PF01839FG-GAP repeat (FG-GAP)FG-GAP repeat- Repeat
PF08441Integrin alpha Ig-like domain 1 (Integrin_A_Ig_1)Integrin alpha Ig-like domain 1This domain is found in integrin alpha and integrin alpha precursors to the C terminus of a number of Pfam:PF01839 repeats and to the N-terminus of the Pfam:PF00357 cytoplasmic region. This region is composed of an immunoglobulin-like domain. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
HUTS-4 VL(C87Y)-SARAH(S37C),HUTS-4 VL(C87Y)-SARAH(S37C)
HUTS-4 VH(S112C)-SARAH,HUTS-4 VH(S112C)-SARAH
TS2/16 VL-SARAH(S37C),TS2/16 VL-SARAH(S37C)
TS2/16 VH(S112C)-SARAH,TS2/16 VH(S112C)-SARAH
Laminin subunit gamma-1
Laminin subunit beta-1
Laminin subunit alpha-5
Integrin beta-1
Integrin alpha-6

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR036674p53-like tetramerisation domain superfamilyHomologous Superfamily
IPR000719Protein kinase domainDomain
IPR017441Protein kinase, ATP binding siteBinding Site
IPR011524SARAH domainDomain
IPR024205Mst1/2 SARAH domainDomain
IPR050629STE20/SPS1-related Proline-Alanine-rich KinaseFamily
IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
IPR036674p53-like tetramerisation domain superfamilyHomologous Superfamily
IPR000719Protein kinase domainDomain
IPR017441Protein kinase, ATP binding siteBinding Site
IPR011524SARAH domainDomain
IPR024205Mst1/2 SARAH domainDomain
IPR050629STE20/SPS1-related Proline-Alanine-rich KinaseFamily
IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
IPR036674p53-like tetramerisation domain superfamilyHomologous Superfamily
IPR000719Protein kinase domainDomain
IPR017441Protein kinase, ATP binding siteBinding Site
IPR011524SARAH domainDomain
IPR024205Mst1/2 SARAH domainDomain
IPR050629STE20/SPS1-related Proline-Alanine-rich KinaseFamily
IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
IPR036674p53-like tetramerisation domain superfamilyHomologous Superfamily
IPR000719Protein kinase domainDomain
IPR017441Protein kinase, ATP binding siteBinding Site
IPR011524SARAH domainDomain
IPR024205Mst1/2 SARAH domainDomain
IPR050629STE20/SPS1-related Proline-Alanine-rich KinaseFamily
IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
IPR008211Laminin, N-terminalDomain
IPR002049Laminin-type EGF domainDomain
IPR000742EGF-like domainDomain
IPR056863Laminin/attractin/netrin-like, EGF domainDomain
IPR050440Laminin/Netrin Extracellular MatrixFamily
IPR000034Laminin IVDomain
IPR008211Laminin, N-terminalDomain
IPR013015Laminin IV type BDomain
IPR002049Laminin-type EGF domainDomain
IPR056558LAMB1/2/3/4, helical domainDomain
IPR000742EGF-like domainDomain
IPR056863Laminin/attractin/netrin-like, EGF domainDomain
IPR050440Laminin/Netrin Extracellular MatrixFamily
IPR008211Laminin, N-terminalDomain
IPR013320Concanavalin A-like lectin/glucanase domain superfamilyHomologous Superfamily
IPR002049Laminin-type EGF domainDomain
IPR010307Laminin domain IIDomain
IPR000742EGF-like domainDomain
IPR001791Laminin G domainDomain
IPR056863Laminin/attractin/netrin-like, EGF domainDomain
IPR009254Laminin alpha, domain IDomain
IPR001368TNFR/NGFR cysteine-rich regionDomain
IPR050440Laminin/Netrin Extracellular MatrixFamily
IPR000034Laminin IVDomain
IPR033760Integrin beta N-terminalDomain
IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily
IPR032695Integrin domain superfamilyHomologous Superfamily
IPR002369Integrin beta subunit, VWA domainDomain
IPR040622Integrin beta, epidermal growth factor-like domain 1Domain
IPR036349Integrin beta tail domain superfamilyHomologous Superfamily
IPR014836Integrin beta subunit, cytoplasmic domainDomain
IPR012896Integrin beta subunit, tailDomain
IPR013111Epidermal growth factor-like domain, extracellularDomain
IPR057073Integrin beta, epidermal growth factor-like domain 2Domain
IPR015812Integrin beta subunitFamily
IPR057243Integrins beta, I-EGF domain, conserved siteConserved Site
IPR016201PSI domainDomain
IPR013517FG-GAP repeatRepeat
IPR013519Integrin alpha beta-propellorRepeat
IPR000413Integrin alpha chainFamily
IPR048286Integrin alpha, third immunoglobulin-like domainDomain
IPR013649Integrin alpha, first immunoglubulin-like domainDomain
IPR028994Integrin alpha, N-terminalHomologous Superfamily
IPR048285Integrin alpha, second immunoglobulin-like domainDomain
IPR032695Integrin domain superfamilyHomologous Superfamily
IPR018184Integrin alpha chain, C-terminal cytoplasmic region, conserved siteConserved Site

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosQ13043
PharosQ13043
PharosQ13043
PharosQ13043
PharosP11047
PharosP07942
PharosO15230
PharosP05556
PharosP23229