Structure of alpha6beta1 integrin in complex with laminin-511
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| I | PsbY | e7cecI1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: PsbY | ECOD (develop294) |
| H | PsbY | e7cecH1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: PsbY | ECOD (develop294) |
| G | Glyco_hydro_108,PG_binding_3 | e7cecG1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Glyco_hydro_108,PG_binding_3 | ECOD (develop294) |
| C | e7cecC1 | A: alpha bundles | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: | ECOD (develop294) | |
| B | Glyco_hydro_108,PG_binding_3 | e7cecB1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Glyco_hydro_108,PG_binding_3 | ECOD (develop294) |
| A | PsbY | e7cecA1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: PsbY | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| H | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
SAbDab Antibody Annotation SAbDab Database Homepage
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|---|---|---|---|---|
| Light Chain | IGKV4 | Kappa | integrin beta-1 | SAbDab (2026-03-20) | |
| Heavy Chain | IGHV8 | - | integrin beta-1 | SAbDab (2026-03-20) | |
| Light Chain | IGKV4 | Kappa | integrin beta-1 | SAbDab (2026-03-20) | |
| Heavy Chain | IGHV5 | - | integrin beta-1 | SAbDab (2026-03-20) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF11629 | C terminal SARAH domain of Mst1 (Mst1_SARAH) | C terminal SARAH domain of Mst1 | - | Family | |
| PF11629 | C terminal SARAH domain of Mst1 (Mst1_SARAH) | C terminal SARAH domain of Mst1 | - | Family | |
| PF02210 | Laminin G domain (Laminin_G_2) | Laminin G domain | This family includes the Thrombospondin N-terminal-like domain, a Laminin G subfamily. | Domain | |
| PF17205 | Integrin plexin domain (PSI_integrin) | Integrin plexin domain | This short disulphide rich domain is found at the N-terminus of integrin beta chains. | Domain | |
| PF00362 | Integrin beta chain VWA domain (Integrin_beta) | Integrin beta chain VWA domain | Integrins have been found in animals and their homologues have also been found in cyanobacteria, probably due to horizontal gene transfer [1]. This domain corresponds to the integrin beta VWA domain. | Domain | |
| PF01839 | FG-GAP repeat (FG-GAP) | FG-GAP repeat | - | Repeat | |
| PF08441 | Integrin alpha Ig-like domain 1 (Integrin_A_Ig_1) | Integrin alpha Ig-like domain 1 | This domain is found in integrin alpha and integrin alpha precursors to the C terminus of a number of Pfam:PF01839 repeats and to the N-terminus of the Pfam:PF00357 cytoplasmic region. This region is composed of an immunoglobulin-like domain. | Domain |














