Annotations: 7JFO

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
P	SCOP2B Superfamily	RuBisCO, small subunit	8069973	3001622	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	RuBisCO, small subunit	8069973	3001622	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	RuBisCO, small subunit	8069973	3001622	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	RuBisCO, small subunit	8069973	3001622	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	RuBisCO, small subunit	8069973	3001622	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	RuBisCO, small subunit	8069973	3001622	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	RuBisCO, small subunit	8069973	3001622	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	RuBisCO, small subunit	8069973	3001622	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	RuBisCo, C-terminal domain	8035888	3000552	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	RuBisCO, large subunit, small (N-terminal) domain	8035891	3001258	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	RuBisCO, large subunit, small (N-terminal) domain	8035891	3001258	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	RuBisCo, C-terminal domain	8035888	3000552	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	RuBisCO, large subunit, small (N-terminal) domain	8035891	3001258	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	RuBisCo, C-terminal domain	8035888	3000552	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	RuBisCO, large subunit, small (N-terminal) domain	8035891	3001258	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	RuBisCo, C-terminal domain	8035888	3000552	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	RuBisCo, C-terminal domain	8035888	3000552	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	RuBisCO, large subunit, small (N-terminal) domain	8035891	3001258	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	RuBisCO, large subunit, small (N-terminal) domain	8035891	3001258	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	RuBisCo, C-terminal domain	8035888	3000552	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	RuBisCo, C-terminal domain	8035888	3000552	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	RuBisCO, large subunit, small (N-terminal) domain	8035891	3001258	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	RuBisCo, C-terminal domain	8035888	3000552	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	RuBisCO, large subunit, small (N-terminal) domain	8035891	3001258	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
P	e7jfoP1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: UCR_14kD	F:	ECOD (20:10:01)
N	e7jfoN1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: UCR_14kD	F:	ECOD (20:10:01)
L	e7jfoL1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: UCR_14kD	F:	ECOD (20:10:01)
J	e7jfoJ1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: UCR_14kD	F:	ECOD (20:10:01)
H	e7jfoH1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: UCR_14kD	F:	ECOD (20:10:01)
F	e7jfoF1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: UCR_14kD	F:	ECOD (20:10:01)
D	e7jfoD1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: UCR_14kD	F:	ECOD (20:10:01)
B	e7jfoB1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: UCR_14kD	F:	ECOD (20:10:01)
O	e7jfoO1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: UCR_14kD	F:	ECOD (20:10:01)
M	e7jfoM1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: UCR_14kD	F:	ECOD (20:10:01)
K	e7jfoK1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: UCR_14kD	F:	ECOD (20:10:01)
I	e7jfoI1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: UCR_14kD	F:	ECOD (20:10:01)
G	e7jfoG1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: UCR_14kD	F:	ECOD (20:10:01)
E	e7jfoE1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: UCR_14kD	F:	ECOD (20:10:01)
C	e7jfoC1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: UCR_14kD	F:	ECOD (20:10:01)
A	e7jfoA1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: UCR_14kD	F:	ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, C, E, G, I A, C, E, G, I, K, M, O	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain (RuBisCO_large_N)	Ribulose bisphosphate carboxylase large chain, N-terminal domain	The N-terminal domain of RuBisCO large chain adopts a ferredoxin-like fold.	Domain
A, C, E, G, I A, C, E, G, I, K, M, O	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain (RuBisCO_large)	Ribulose bisphosphate carboxylase large chain, catalytic domain	The C-terminal domain of RuBisCO large chain is the catalytic domain adopting a TIM barrel fold.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
Q [auth q], R [auth r], S [auth s], T [auth t], U [auth u], Q [auth q], R [auth r], S [auth s], T [auth t], U [auth u], V [auth v], W [auth w], X [auth x]	LCI5	-	-	-
B, D, F, H, J B, D, F, H, J, L, N, P	Ribulose bisphosphate carboxylase small chain 2, chloroplastic	ribulose-bisphosphate carboxylase activity carboxy-lyase activity lyase activity catalytic activity carbon-carbon lyase activity	metabolic compound salvage biosynthetic process metabolic process cellular process photorespiration carbohydrate metabolic process photosynthesis reductive pentose-phosphate cycle carbohydrate biosynthetic process photosynthesis, dark reaction primary metabolic process carbon fixation	membrane-bounded organelle intracellular anatomical structure plastid intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure plastid stroma organelle chloroplast stroma cytoplasm chloroplast
A, C, E, G, I A, C, E, G, I, K, M, O	Ribulose bisphosphate carboxylase large chain	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding ribulose-bisphosphate carboxylase activity carboxy-lyase activity lyase activity catalytic activity carbon-carbon lyase activity monooxygenase activity oxidoreductase activity	metabolic compound salvage biosynthetic process metabolic process cellular process photorespiration carbohydrate metabolic process photosynthesis reductive pentose-phosphate cycle carbohydrate biosynthetic process photosynthesis, dark reaction primary metabolic process carbon fixation	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle chloroplast

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B, D, F, H, J B, D, F, H, J, L, N, P	IPR036385	Ribulose bisphosphate carboxylase, small subunit superfamily	Homologous Superfamily
B, D, F, H, J B, D, F, H, J, L, N, P	IPR024681	Ribulose bisphosphate carboxylase, small subunit	Family
B, D, F, H, J B, D, F, H, J, L, N, P	IPR000894	Ribulose bisphosphate carboxylase small subunit, domain	Domain
A, C, E, G, I A, C, E, G, I, K, M, O	IPR020888	Ribulose bisphosphate carboxylase large subunit, type I	Family
A, C, E, G, I A, C, E, G, I, K, M, O	IPR036376	Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily	Homologous Superfamily
A, C, E, G, I A, C, E, G, I, K, M, O	IPR020878	Ribulose bisphosphate carboxylase, large chain, active site	Active Site
A, C, E, G, I A, C, E, G, I, K, M, O	IPR000685	Ribulose bisphosphate carboxylase, large subunit, C-terminal	Domain
A, C, E, G, I A, C, E, G, I, K, M, O	IPR033966	RuBisCO	Family
A, C, E, G, I A, C, E, G, I, K, M, O	IPR017443	Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal	Domain
A, C, E, G, I A, C, E, G, I, K, M, O	IPR036422	RuBisCO large subunit, N-terminal domain superfamily	Homologous Superfamily

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, C, E, G, I A, C, E, G, I, K, M, O	SMC	Parent Component: CYS RESID: AA0234 PSI-MOD : S-methyl-L-cysteine MOD:00239