7KBA | pdb_00007kba

Crystal structure of the HCMV pentamer-specific Fab 2-18


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth L]LbH_EIF2Be7kbaL1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: LbH_EIF2BECOD (develop294)
BRNase_He7kbaB1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: RNase_HECOD (develop294)
ALbH_EIF2Be7kbaA1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: LbH_EIF2BECOD (develop294)
C [auth H]RNase_He7kbaH1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: RNase_HECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B,
D [auth L]
Light ChainIGKV1 Kappa-SAbDab (2026-03-20)
A,
C [auth H]
Heavy ChainIGHV3 --SAbDab (2026-03-20)

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A,
C [auth H]
PCA Parent Component: GLN

RESIDAA0031

PSI-MOD :  2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420