7KH9
Crystal structure of OXA-48 K73A in complex with imipenem
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | d7kh9b1 | Multi-domain proteins (alpha and beta) | beta-lactamase/transpeptidase-like | beta-lactamase/transpeptidase-like | automated matches | automated matches | (Klebsiella pneumoniae ) [TaxId: 573 ], | SCOPe (2.08) |
A [auth B] | d7kh9b2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Klebsiella pneumoniae ) [TaxId: 573 ], | SCOPe (2.08) |
B [auth A] | d7kh9a1 | Multi-domain proteins (alpha and beta) | beta-lactamase/transpeptidase-like | beta-lactamase/transpeptidase-like | automated matches | automated matches | (Klebsiella pneumoniae ) [TaxId: 573 ], | SCOPe (2.08) |
B [auth A] | d7kh9a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Klebsiella pneumoniae ) [TaxId: 573 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | beta-lactamase/transpeptidase-like | 8074295 | 3001604 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | beta-lactamase/transpeptidase-like | 8074295 | 3001604 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | Transpeptidase_1st | e7kh9B1 | A: alpha complex topology | X: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology) | H: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology) | T: alpha-helical domain in beta-lactamase/transpeptidase-like proteins | F: Transpeptidase_1st | ECOD (1.6) |
A [auth B] | Transpeptidase_2nd_1 | e7kh9B2 | A: a+b three layers | X: Profilin-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins (From Topology) | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: Transpeptidase_2nd_1 | ECOD (1.6) |
B [auth A] | Transpeptidase_1st | e7kh9A1 | A: alpha complex topology | X: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology) | H: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology) | T: alpha-helical domain in beta-lactamase/transpeptidase-like proteins | F: Transpeptidase_1st | ECOD (1.6) |
B [auth A] | Transpeptidase_2nd_1 | e7kh9A2 | A: a+b three layers | X: Profilin-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins (From Topology) | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: Transpeptidase_2nd_1 | ECOD (1.6) |
AMR Gene Family: CARD Annotation CARD Database Homepage
Chains | Accession | Gene Family | Drug Class | Resistance Machanism | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B], B [auth A] | ARO:3007721 | OXA-48-like beta-lactamase | carbapenem, penam | antibiotic inactivation | CARD (3.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF00905 | Penicillin binding protein transpeptidase domain (Transpeptidase) | Penicillin binding protein transpeptidase domain | The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A] | IPR012338 | Beta-lactamase/transpeptidase-like | Homologous Superfamily |
A [auth B], B [auth A] | IPR001460 | Penicillin-binding protein, transpeptidase | Domain |
A [auth B], B [auth A] | IPR050515 | Bacterial Transpeptidases and Beta-Lactamases | Family |
A [auth B], B [auth A] | IPR002137 | Beta-lactamase, class-D active site | Active Site |