Crystal structure of the HCMV pentamer-specific antibody 1-103


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
G [auth E]Utp12e7lyvE1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Utp12ECOD (v294.2)
E [auth A]Utp12e7lyvA1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Utp12ECOD (v294.2)
CUtp12e7lyvC1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Utp12ECOD (v294.2)
A [auth H]F-actin_cap_Ae7lyvH1 A: beta barrelsX: DNA methylase specificity domainH: BromodomainT: BromodomainF: F-actin_cap_AECOD (v294.2)
H [auth F]Utp12e7lyvF1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Utp12ECOD (v294.2)
F [auth B]Utp12e7lyvB1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Utp12ECOD (v294.2)
DUtp12e7lyvD1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Utp12ECOD (v294.2)
B [auth L]F-actin_cap_Ae7lyvL1 A: beta barrelsX: DNA methylase specificity domainH: BromodomainT: BromodomainF: F-actin_cap_AECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
E [auth A]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
H [auth F]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
F [auth B]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
D2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
B [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A [auth H],
C,
E [auth A],
G [auth E]
Heavy ChainIGHV4 --SAbDab (2026-05-08)
B [auth L],
D,
F [auth B],
H [auth F]
Light ChainIGKV1 Kappa-SAbDab (2026-05-08)

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A [auth H],
C,
E [auth A],
G [auth E]
PCA Parent Component: GLN

AA0031

:  2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420