7NFX

Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
F [auth B]SCOP2B SuperfamilyTranslational proteins 8078357 3000811 SCOP2B (2022-06-29)
G [auth C]SCOP2B SuperfamilyRibosomal protein L4 8052829 3001146 SCOP2B (2022-06-29)
G [auth C]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like 8052828 3002143 SCOP2B (2022-06-29)
M [auth I]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8097320 3000884 SCOP2B (2022-06-29)
N [auth J]SCOP2B SuperfamilyRL5-like 8073894 3001709 SCOP2B (2022-06-29)
Q [auth N]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082477 3000210 SCOP2B (2022-06-29)
T [auth Q]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8095982 3001045 SCOP2B (2022-06-29)
X [auth U]SCOP2B Superfamily60S Ribosomal protein L22e 8061156 3002158 SCOP2B (2022-06-29)
Y [auth V]SCOP2B Superfamily50S Ribosomal protein L14-like 8072048 3000433 SCOP2B (2022-06-29)
AA [auth X]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8095966 3000210 SCOP2B (2022-06-29)
BA [auth Y]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076754 3000334 SCOP2B (2022-06-29)
CA [auth Z]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053047 3000334 SCOP2B (2022-06-29)
DA [auth a]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8097818 3001045 SCOP2B (2022-06-29)
HA [auth e]SCOP2B SuperfamilyRibosomal protein L32e 8102088 3000982 SCOP2B (2022-06-29)
IA [auth f]SCOP2B SuperfamilyTranslational proteins 8093714 3000811 SCOP2B (2022-06-29)
JA [auth g]SCOP2B SuperfamilyRibosomal protein L34e-like 8103328 3002203 SCOP2B (2022-06-29)
OA [auth l]SCOP2B SuperfamilyRibosomal protein L39e 8095595 3001756 SCOP2B (2022-06-29)
SA [auth p]SCOP2B SuperfamilyZn-binding ribosomal proteins 8101435 3001320 SCOP2B (2022-06-29)
TA [auth q]SCOP2B SuperfamilySRP19 8037027 3000831 SCOP2B (2022-06-29)
WA [auth t]SCOP2B SuperfamilySignal recognition particle alu RNA binding heterodimer, SRP9/14 8035087 3000976 SCOP2B (2022-06-29)
XA [auth u]SCOP2B SuperfamilyTPR-like 8053751 3001345 SCOP2B (2022-06-29)
YA [auth v]SCOP2 FamilyRas-like monodomain GTPases 8103533 4004043 SCOP2 (2022-06-29)
YA [auth v]SCOP2 SuperfamilyRas-like P-loop GTPases 8103534 3002022 SCOP2 (2022-06-29)
ZA [auth w]SCOP2B SuperfamilySignal recognition particle alu RNA binding heterodimer, SRP9/14 8035086 3000976 SCOP2B (2022-06-29)
AB [auth x]SCOP2B SuperfamilySignal peptide binding domain-like 8057742 3001939 SCOP2B (2022-06-29)
BB [auth y]SCOP2B SuperfamilySNARE-like 8040933 3001113 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
E [auth A]Ribosomal_L2_1e7nfxA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
E [auth A]Ribosomal_L2_C_2e7nfxA2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
F [auth B]Ribosomal_L3e7nfxB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
G [auth C]Ribosomal_L4e7nfxC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
G [auth C]Ribos_L4_asso_Ce7nfxC2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
H [auth D]Ribosomal_L5ee7nfxD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
I [auth E]Ribosomal_L6ee7nfxE1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
J [auth F]Ribosomal_L30_1e7nfxF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
K [auth G]Ribosomal_L7Ae_1e7nfxG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
L [auth H]Ribosomal_L6_2e7nfxH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
L [auth H]Ribosomal_L6e7nfxH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
M [auth I]Ribosomal_L16e7nfxI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
N [auth J]Ribosomal_L5_Ce7nfxJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
O [auth L]Ribosomal_L13ee7nfxL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
P [auth M]Ribosomal_L14ee7nfxM1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
Q [auth N]Ribosomal_L15ee7nfxN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
R [auth O]Ribosomal_L13e7nfxO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
S [auth P]Ribosomal_L22e7nfxP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
T [auth Q]Ribosomal_L18e7nfxQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
U [auth R]Ribosomal_L19e_Ne7nfxR2 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
U [auth R]Ribosomal_L19e_Ce7nfxR1 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
V [auth S]Ribosomal_L18Ae7nfxS2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
W [auth T]Ribosomal_L21ee7nfxT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
X [auth U]Ribosomal_L22ee7nfxU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
Y [auth V]Ribosomal_L14e7nfxV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
Z [auth W]Ribosomal_L24ee7nfxW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
AA [auth X]Ribosomal_L23_3e7nfxX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
BA [auth Y]Ribosomal_L26e7nfxY1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
CA [auth Z]Ribosomal_L27ee7nfxZ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
DA [auth a]Ribosomal_L18e7nfxa1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
EA [auth b]Ribosomal_L29ee7nfxb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
FA [auth c]Ribosomal_L7Aee7nfxc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
GA [auth d]Ribosomal_L31ee7nfxd1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
HA [auth e]Ribosomal_L32ee7nfxe1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
IA [auth f]Ribosomal_L35Aee7nfxf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
JA [auth g]Ribosomal_L34ee7nfxg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
KA [auth h]Ribosomal_L29_2e7nfxh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
LA [auth i]Ribosomal_L36ee7nfxi1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
MA [auth j]Ribosomal_L37ee7nfxj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
NA [auth k]Ribosomal_L38ee7nfxk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
OA [auth l]Ribosomal_L39e7nfxl1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
PA [auth m]Ribosomal_L40ee7nfxm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
QA [auth n]Ribosomal_L41e7nfxn1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
RA [auth o]Ribosomal_L44e7nfxo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
SA [auth p]Ribosomal_L37aee7nfxp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
TA [auth q]SRP19e7nfxq1 A: alpha arraysX: HTHH: HTHT: Putative DNA-binding domainF: SRP19ECOD (1.6)
UA [auth r]Ribosomal_L28ee7nfxr1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: Ribosomal_L28eECOD (1.6)
WA [auth t]SRP14e7nfxt1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: SRP14ECOD (1.6)
XA [auth u]SRP68e7nfxu1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: SRP68ECOD (1.6)
YA [auth v]MnmE_helical_2nde7nfxv1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MnmE_helical_2ndECOD (1.6)
ZA [auth w]SRP9-21e7nfxw1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: SRP9-21ECOD (1.6)
AB [auth x]SRP_SPBe7nfxx1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: SRP_SPBECOD (1.6)
AB [auth x]SRP54_Ne7nfxx3 A: alpha bundlesX: Domain of the SRP/SRP receptor G proteins-likeH: Domain of the SRP/SRP receptor G-proteins (From Topology)T: Domain of the SRP/SRP receptor G-proteinsF: SRP54_NECOD (1.6)
AB [auth x]SRP54e7nfxx2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: SRP54ECOD (1.6)
BB [auth y]SRP-alpha_Ne7nfxy1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: SRP-alpha_NECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E [auth A]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
F [auth B]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
G [auth C]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins. Domain
G [auth C]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
H [auth D]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
I [auth E]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
I [auth E]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
J [auth F]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1]. Domain
J [auth F]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
K [auth G]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...Domain
L [auth H]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
L [auth H]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
M [auth I]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
N [auth J]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
N [auth J]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
N [auth J]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
O [auth L]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
P [auth M]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
P [auth M]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
Q [auth N]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
R [auth O]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
S [auth P]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
S [auth P]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
T [auth Q]PF01922SRP19 protein (SRP19)SRP19 protein- Family
T [auth Q]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
U [auth R]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
U [auth R]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
W [auth T]PF02290Signal recognition particle 14kD protein (SRP14)Signal recognition particle 14kD proteinThe signal recognition particle (SRP) is a multimeric protein involved in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP14 and SRP9 form a complex essential for SRP RNA binding. Domain
X [auth U]PF16969RNA-binding signal recognition particle 68 (SRP68)RNA-binding signal recognition particle 68- Family
X [auth U]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
Y [auth V]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
Z [auth W]PF05486Signal recognition particle 9 kDa protein (SRP9) (SRP9-21)Signal recognition particle 9 kDa protein (SRP9)This family consists of several eukaryotic SRP9 proteins. SRP9 together with the Alu-homologous region of 7SL RNA and SRP14 comprise the "Alu domain" of SRP, which mediates pausing of synthesis of ribosome associated nascent polypeptides that have be ...Domain
Z [auth W]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
AA [auth X]PF00448SRP54-type protein, GTPase domain (SRP54)SRP54-type protein, GTPase domainThis family includes relatives of the G-domain of the SRP54 family of proteins. Domain
AA [auth X]PF02881SRP54-type protein, helical bundle domain (SRP54_N)SRP54-type protein, helical bundle domainDomain
AA [auth X]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
BA [auth Y]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
BA [auth Y]PF04086Signal recognition particle, alpha subunit, N-terminal (SRP-alpha_N)Signal recognition particle, alpha subunit, N-terminal- Family
BA [auth Y]PF00467KOW motif (KOW)KOW motif- Family
CA [auth Z]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
CA [auth Z]PF00467KOW motif (KOW)KOW motif- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 1]SRP RNA 7SL---
B [auth 5]28S ribosomal RNA---
C [auth 7]5S ribosomal RNA---
D [auth 8]5.8S ribosomal RNA---
E [auth A]uL2---
F [auth B]uL3
G [auth C]60S ribosomal protein L4
H [auth D]60S ribosomal protein L5
I [auth E]60S ribosomal protein L6
J [auth F]uL30
K [auth G]60S ribosomal protein L7a -
L [auth H]60S ribosomal protein L9
M [auth I]60S ribosomal protein L10
N [auth J]Ribosomal protein L11
O [auth L]60S ribosomal protein L13- - -
P [auth M]60S ribosomal protein L14
Q [auth N]Ribosomal protein L15
R [auth O]uL13---
S [auth P]uL22
T [auth Q]eL18
U [auth R]60S RIBOSOMAL PROTEIN EL19
V [auth S]eL20---
W [auth T]eL21
X [auth U]Ribosomal protein L22
Y [auth V]Ribosomal protein L23
Z [auth W]Ribosomal protein L24
AA [auth X]uL23
BA [auth Y]Ribosomal protein L26
CA [auth Z]60S ribosomal protein L27
DA [auth a]uL15
EA [auth b]60S ribosomal protein L29
FA [auth c]eL30---
GA [auth d]eL31
HA [auth e]eL32
IA [auth f]eL33
JA [auth g]60S ribosomal protein L34
KA [auth h]uL29
LA [auth i]eL36---
MA [auth j]Ribosomal protein L37
NA [auth k]eL38---
OA [auth l]eL39
PA [auth m]60S RIBOSOMAL PROTEIN EL40
QA [auth n]60s ribosomal protein l41
RA [auth o]eL42
SA [auth p]eL43
TA [auth q]Signal recognition particle 19 kDa protein
UA [auth r]eL28
VA [auth s]Signal Sequence---
WA [auth t]Signal recognition particle 14 kDa protein
XA [auth u]Signal recognition particle subunit SRP68
YA [auth v]Signal recognition particle receptor subunit beta
ZA [auth w]Signal recognition particle 9 kDa protein
AB [auth x]Signal recognition particle 54 kDa protein
BB [auth y]Signal recognition particle receptor subunit alpha
CB [auth z]Signal recognition particle subunit SRP72

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
F [auth B]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
F [auth B]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
F [auth B]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
F [auth B]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
F [auth B]IPR000597Large ribosomal subunit protein uL3Family
G [auth C]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
G [auth C]IPR002136Large ribosomal subunit protein uL4Family
G [auth C]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
G [auth C]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
G [auth C]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
H [auth D]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
H [auth D]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
I [auth E]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
I [auth E]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
I [auth E]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
I [auth E]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
I [auth E]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
I [auth E]IPR000915Large ribosomal subunit protein eL6Family
J [auth F]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
J [auth F]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
J [auth F]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
J [auth F]IPR039699Large ribosomal subunit protein uL30Family
J [auth F]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
J [auth F]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
J [auth F]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
K [auth G]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
K [auth G]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
K [auth G]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
K [auth G]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
K [auth G]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
L [auth H]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
L [auth H]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
L [auth H]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
L [auth H]IPR000702Large ribosomal subunit protein uL6-likeFamily
M [auth I]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
M [auth I]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
M [auth I]IPR016180Large ribosomal subunit protein uL16 domainDomain
M [auth I]IPR047873Large ribosomal subunit protein uL16Family
M [auth I]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
N [auth J]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
N [auth J]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
N [auth J]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
N [auth J]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
N [auth J]IPR002132Large ribosomal subunit protein uL5Family
P [auth M]IPR039660Large ribosomal subunit protein eL14Family
P [auth M]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
P [auth M]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
P [auth M]IPR002784Large ribosomal subunit protein eL14 domainDomain
P [auth M]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Q [auth N]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Q [auth N]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
Q [auth N]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
Q [auth N]IPR000439Large ribosomal subunit protein eL15Family
S [auth P]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
S [auth P]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
S [auth P]IPR001063Large ribosomal subunit protein uL22Family
S [auth P]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
T [auth Q]IPR021131Large ribosomal subunit protein uL15/eL18Domain
T [auth Q]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
T [auth Q]IPR000039Large ribosomal subunit protein eL18Family
T [auth Q]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
U [auth R]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
U [auth R]IPR039547Large ribosomal subunit protein eL19Family
U [auth R]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
U [auth R]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
U [auth R]IPR000196Large ribosomal subunit protein eL19 domainDomain
U [auth R]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
W [auth T]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
W [auth T]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
W [auth T]IPR001147Large ribosomal subunit protein eL21Family
W [auth T]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
X [auth U]IPR002671Large ribosomal subunit protein eL22Family
X [auth U]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
Y [auth V]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
Y [auth V]IPR000218Large ribosomal subunit protein uL14Family
Y [auth V]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
Z [auth W]IPR011017TRASH domainDomain
Z [auth W]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
Z [auth W]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
Z [auth W]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
AA [auth X]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
AA [auth X]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
AA [auth X]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
AA [auth X]IPR019985Large ribosomal subunit protein uL23Family
AA [auth X]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
AA [auth X]IPR013025Large ribosomal subunit protein uL23-likeFamily
BA [auth Y]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
BA [auth Y]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
BA [auth Y]IPR005824KOWDomain
BA [auth Y]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BA [auth Y]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
BA [auth Y]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
CA [auth Z]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
CA [auth Z]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
CA [auth Z]IPR005824KOWDomain
CA [auth Z]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CA [auth Z]IPR001141Large ribosomal subunit protein eL27Family
CA [auth Z]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
DA [auth a]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
DA [auth a]IPR021131Large ribosomal subunit protein uL15/eL18Domain
DA [auth a]IPR030878Large ribosomal subunit protein uL15Family
DA [auth a]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
DA [auth a]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
EA [auth b]IPR002673Large ribosomal subunit protein eL29Family
GA [auth d]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
GA [auth d]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
GA [auth d]IPR000054Large ribosomal subunit protein eL31Family
HA [auth e]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
HA [auth e]IPR001515Large ribosomal subunit protein eL32Family
HA [auth e]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
IA [auth f]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
IA [auth f]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
IA [auth f]IPR001780Large ribosomal subunit protein eL33Family
IA [auth f]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
JA [auth g]IPR008195Large ribosomal subunit protein eL34Family
JA [auth g]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
JA [auth g]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
KA [auth h]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
KA [auth h]IPR001854Large ribosomal subunit protein uL29Family
KA [auth h]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
KA [auth h]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
MA [auth j]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
MA [auth j]IPR001569Large ribosomal subunit protein eL37Family
MA [auth j]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
MA [auth j]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
OA [auth l]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
OA [auth l]IPR000077Large ribosomal subunit protein eL39Family
OA [auth l]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
PA [auth m]IPR019954Ubiquitin conserved siteConserved Site
PA [auth m]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
PA [auth m]IPR000626Ubiquitin-like domainDomain
PA [auth m]IPR019956Ubiquitin domainDomain
PA [auth m]IPR050158Ubiquitin and ubiquitin-likeFamily
PA [auth m]IPR001975Large ribosomal subunit protein eL40 domainDomain
PA [auth m]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
QA [auth n]IPR007836Large ribosomal subunit protein eS32Family
RA [auth o]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
RA [auth o]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
RA [auth o]IPR000552Large ribosomal subunit protein eL42Family
SA [auth p]IPR002674Large ribosomal subunit protein eL43Family
SA [auth p]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
SA [auth p]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
TA [auth q]IPR002778Signal recognition particle, SRP19 subunitFamily
TA [auth q]IPR036521Signal recognition particle, subunit SRP19-like superfamilyHomologous Superfamily
UA [auth r]IPR029004Ribosomal eL28/Mak16Domain
UA [auth r]IPR002672Large ribosomal subunit protein eL28Family
WA [auth t]IPR003210Signal recognition particle, SRP14 subunitFamily
WA [auth t]IPR009018Signal recognition particle, SRP9/SRP14 subunitHomologous Superfamily
XA [auth u]IPR038253SRP68, N-terminal domain superfamilyHomologous Superfamily
XA [auth u]IPR034652Signal recognition particle subunit SRP68, RNA-binding domainDomain
XA [auth u]IPR026258Signal recognition particle subunit SRP68Family
YA [auth v]IPR024156Small GTPase superfamily, ARF typeFamily
YA [auth v]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
YA [auth v]IPR019009Signal recognition particle receptor, beta subunitFamily
ZA [auth w]IPR008832Signal recognition particle SRP9Family
ZA [auth w]IPR009018Signal recognition particle, SRP9/SRP14 subunitHomologous Superfamily
ZA [auth w]IPR039432SRP9 domainDomain
ZA [auth w]IPR039914Signal recognition particle SRP9-likeFamily
AB [auth x]IPR000897Signal recognition particle, SRP54 subunit, GTPase domainDomain
AB [auth x]IPR004125Signal recognition particle, SRP54 subunit, M-domainDomain
AB [auth x]IPR003593AAA+ ATPase domainDomain
AB [auth x]IPR013822Signal recognition particle SRP54, helical bundleDomain
AB [auth x]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
AB [auth x]IPR022941Signal recognition particle, SRP54 subunitFamily
AB [auth x]IPR036225SRP/SRP receptor, N-terminalHomologous Superfamily
AB [auth x]IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyHomologous Superfamily
AB [auth x]IPR006325Signal recognition particle, SRP54 subunit, eukaryoticFamily
AB [auth x]IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilyHomologous Superfamily
BB [auth y]IPR000897Signal recognition particle, SRP54 subunit, GTPase domainDomain
BB [auth y]IPR036225SRP/SRP receptor, N-terminalHomologous Superfamily
BB [auth y]IPR011012Longin-like domain superfamilyHomologous Superfamily
BB [auth y]IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyHomologous Superfamily
BB [auth y]IPR003593AAA+ ATPase domainDomain
BB [auth y]IPR007222Signal recognition particle receptor, alpha subunit, N-terminalDomain
BB [auth y]IPR013822Signal recognition particle SRP54, helical bundleDomain
BB [auth y]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
CB [auth z]IPR013699Signal recognition particle, SRP72 subunit, RNA-bindingDomain
CB [auth z]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
CB [auth z]IPR031545Signal recognition particle subunit SRP72, TPR-like repeatRepeat
CB [auth z]IPR026270Signal recognition particle, SRP72 subunitFamily
CB [auth z]IPR019734Tetratricopeptide repeatRepeat

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
TA [auth q]PharosP09132
WA [auth t]PharosP37108
XA [auth u]PharosQ9UHB9
YA [auth v]PharosQ9Y5M8
ZA [auth w]PharosP49458
AB [auth x]PharosP61011
BB [auth y]PharosP08240
CB [auth z]PharosO76094