7PWO | pdb_00007pwo

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
F [auth S1]SCOP2 FamilyRibosomal protein S13 8107203 4000260 SCOP2 (2022-06-29)
F [auth S1]SCOP2 SuperfamilyS13-like H2TH domain 8107204 3000053 SCOP2 (2022-06-29)
G [auth Q1]SCOP2 FamilyTranslational machinery components 8107183 4000951 SCOP2 (2022-06-29)
G [auth Q1]SCOP2 SuperfamilyRibosomal protein S5 domain 2-like 8107184 3000100 SCOP2 (2022-06-29)
I [auth B1]SCOP2 FamilyRibosomal S3Ae 8107199 4006095 SCOP2 (2022-06-29)
I [auth B1]SCOP2 SuperfamilyRibosomal S3Ae-like 8107200 3002166 SCOP2 (2022-06-29)
L [auth V1]SCOP2 FamilyRibosomal protein S21e 8107163 4006215 SCOP2 (2022-06-29)
L [auth V1]SCOP2 SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8107164 3000068 SCOP2 (2022-06-29)
S [auth c1]SCOP2 FamilyCold shock DNA-binding domain-like 8107165 4001909 SCOP2 (2022-06-29)
S [auth c1]SCOP2 SuperfamilyNucleic acid-binding proteins 8107166 3000135 SCOP2 (2022-06-29)
X [auth U1]SCOP2 FamilyRibosomal protein S10 8107167 4001240 SCOP2 (2022-06-29)
X [auth U1]SCOP2 SuperfamilyRibosomal protein S10 8107168 3001336 SCOP2 (2022-06-29)
EA [auth D2]SCOP2 FamilyRibosomal protein L5e and archael L18-like 8107235 4006591 SCOP2 (2022-06-29)
EA [auth D2]SCOP2 SuperfamilyTranslational machinery components 8107236 3000571 SCOP2 (2022-06-29)
IA [auth I2]SCOP2 FamilyRibosomal protein L10e 8107185 4001135 SCOP2 (2022-06-29)
IA [auth I2]SCOP2 SuperfamilyRibosomal protein L16p/L10e 8107186 3000884 SCOP2 (2022-06-29)
JA [auth J2]SCOP2 FamilyRibosomal protein L5 8107181 4001498 SCOP2 (2022-06-29)
JA [auth J2]SCOP2 SuperfamilyRL5-like 8107182 3001709 SCOP2 (2022-06-29)
QA [auth R2]SCOP2 FamilyRibosomal protein L19 (L19e) 8107179 4001138 SCOP2 (2022-06-29)
QA [auth R2]SCOP2 SuperfamilyRibosomal protein L19 (L19e) 8107180 3000890 SCOP2 (2022-06-29)
UA [auth V2]SCOP2B Superfamily50S Ribosomal protein L14-like 8107198 3000433 SCOP2B (2022-06-29)
AB [auth c2]SCOP2B SuperfamilyL30e-like 8107172 3001739 SCOP2B (2022-06-29)
CB [auth e2]SCOP2 FamilyRibosomal protein L32e 8107187 4003517 SCOP2 (2022-06-29)
CB [auth e2]SCOP2 SuperfamilyRibosomal protein L32e 8107188 3000982 SCOP2 (2022-06-29)
EB [auth g2]SCOP2 FamilyRibosomal protein L34e-like 8107189 4006193 SCOP2 (2022-06-29)
EB [auth g2]SCOP2 SuperfamilyRibosomal protein L34e-like 8107190 3002203 SCOP2 (2022-06-29)
JB [auth l2]SCOP2B SuperfamilyRibosomal protein L39e 8107108 3001756 SCOP2B (2022-06-29)
KB [auth m2]SCOP2B SuperfamilyZn-binding ribosomal proteins 8107202 3001320 SCOP2B (2022-06-29)
RB [auth F1]SCOP2 FamilyRibosomal protein S7 8107207 4001112 SCOP2 (2022-06-29)
RB [auth F1]SCOP2 SuperfamilyRibosomal protein S7 8107208 3000799 SCOP2 (2022-06-29)
SB [auth Y1]SCOP2 FamilyRibosomal protein S24e 8107169 4003636 SCOP2 (2022-06-29)
SB [auth Y1]SCOP2 SuperfamilyRibosomal proteins S24e, L23 and L15e 8107170 3000210 SCOP2 (2022-06-29)
VB [auth A1]SCOP2 FamilyRibosomal protein S2-like 8107177 4003744 SCOP2 (2022-06-29)
VB [auth A1]SCOP2 SuperfamilySIS domain/Ribosomal protein S2-like 8107178 3001397 SCOP2 (2022-06-29)
MB [auth p2]SCOP2 FamilyRibosomal protein L37ae 8107191 4003704 SCOP2 (2022-06-29)
MB [auth p2]SCOP2 SuperfamilyZn-binding ribosomal proteins 8107192 3001320 SCOP2 (2022-06-29)
YA [auth a2]SCOP2 FamilyRibosomal proteins L15p and L18e 8107205 4003555 SCOP2 (2022-06-29)
YA [auth a2]SCOP2 SuperfamilyRibosomal proteins L15p and L18e 8107206 3001045 SCOP2 (2022-06-29)
OA [auth P2]SCOP2B SuperfamilyRibosomal protein L22 8107176 3001078 SCOP2B (2022-06-29)
MA [auth N2]SCOP2 FamilyL15e 8107173 4000945 SCOP2 (2022-06-29)
MA [auth N2]SCOP2 SuperfamilyRibosomal proteins S24e, L23 and L15e 8107174 3000210 SCOP2 (2022-06-29)
CA [auth B2]SCOP2B SuperfamilyTranslational proteins 8107196 3000811 SCOP2B (2022-06-29)
U [auth W1]SCOP2 FamilyRibosomal protein S8 8107237 4002027 SCOP2 (2022-06-29)
U [auth W1]SCOP2 SuperfamilyRibosomal protein S8 8107238 3000709 SCOP2 (2022-06-29)
T [auth O1]SCOP2 FamilyRibosomal protein L18p and S11 8107239 4000555 SCOP2 (2022-06-29)
T [auth O1]SCOP2 SuperfamilyTranslational machinery components 8107240 3000571 SCOP2 (2022-06-29)
K [auth a1]SCOP2 FamilyRibosomal protein S26e 8107193 4006236 SCOP2 (2022-06-29)
K [auth a1]SCOP2 SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8107194 3000068 SCOP2 (2022-06-29)
A [auth T1]SCOP2B SuperfamilyWinged helix DNA-binding domain 8107538 3000034 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth J1]S4e7pwoJ11 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
D [auth D1]Ribosomal_S3_Ce7pwoD12 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
D [auth D1]KH_2_3e7pwoD11 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
E [auth X1]Ribosom_S12_S23e7pwoX11 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
F [auth S1]Ribosomal_S13e7pwoS11 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
G [auth Q1]Ribosomal_S9e7pwoQ11 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
I [auth B1]Ribosomal_S3Ae_Ne7pwoB11 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
I [auth B1]Ribosomal_S3Ae_Ce7pwoB12 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
J [auth b1]Ribosomal_S27ee7pwob11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
L [auth V1]Ribosomal_S21ee7pwoV11 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
M [auth R1]Ribosomal_S17ee7pwoR11 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
N [auth K1]S10_plectine7pwoK11 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
P [auth e1]Ribosomal_S30e7pwoe11 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
R [auth n1]Ribosomal_L41e7pwon11 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
S [auth c1]Ribosomal_S28ee7pwoc11 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
V [auth E1]Ribosomal_S4ee7pwoE12 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
V [auth E1]40S_S4_Ce7pwoE13 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
V [auth E1]RS4NTe7pwoE11 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
X [auth U1]Ribosomal_S10_1e7pwoU11 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
EA [auth D2]Ribosomal_L5ee7pwoD21 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
GA [auth G2]Ribosomal_L7Ae_1e7pwoG21 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
IA [auth I2]Ribosomal_L16e7pwoI21 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
JA [auth J2]Ribosomal_L5_Ce7pwoJ21 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
LA [auth M2]Ribosomal_L14ee7pwoM21 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
NA [auth O2]Ribosomal_L13e7pwoO21 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
PA [auth Q2]Ribosomal_L18e7pwoQ21 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
QA [auth R2]Ribosomal_L19e_Ne7pwoR21 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
QA [auth R2]Ribosomal_L19e_Ce7pwoR22 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
UA [auth V2]Ribosomal_L14e7pwoV21 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
VA [auth X2]Ribosomal_L23_3e7pwoX21 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
ZA [auth b2]Ribosomal_L29ee7pwob21 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
AB [auth c2]Ribosomal_L7Aee7pwoc21 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
BB [auth d2]Ribosomal_L31ee7pwod21 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
CB [auth e2]Ribosomal_L32ee7pwoe21 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
EB [auth g2]Ribosomal_L34ee7pwog21 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
FB [auth h2]Ribosomal_L29_2e7pwoh21 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
IB [auth k2]Ribosomal_L38ee7pwok21 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
JB [auth l2]Ribosomal_L39e7pwol21 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
KB [auth m2]Ribosomal_L40ee7pwom21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
LB [auth o2]Ribosomal_L44e7pwoo21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
QB [auth d1]Ribosomal_S14_2e7pwod11 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
RB [auth F1]Ribosomal_S7_1e7pwoF11 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
SB [auth Y1]Ribosomal_S24ee7pwoY11 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
TB [auth G1]Ribosomal_S6ee7pwoG11 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
H [auth C1]Ribosomal_S5_C_1e7pwoC12 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
H [auth C1]Ribosomal_S5_3e7pwoC13 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
H [auth C1]Ribosomal_S5_2e7pwoC11 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
VB [auth A1]Ribosomal_S2_2e7pwoA11 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
OB [auth W2]Ribosomal_L24ee7pwoW21 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
MB [auth p2]Ribosomal_L37aee7pwop21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
HB [auth j2]Ribosomal_L37ee7pwoj21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
DB [auth f2]Ribosomal_L35Aee7pwof21 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
YA [auth a2]Ribosomal_L18e7pwoa21 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
XA [auth Z2]Ribosomal_L27ee7pwoZ21 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
WA [auth Y2]Ribosomal_L26e7pwoY21 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
TA [auth U2]Ribosomal_L22ee7pwoU21 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
SA [auth T2]Ribosomal_L21ee7pwoT21 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
RA [auth S2]Ribosomal_L18Ae7pwoS21 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
OA [auth P2]Ribosomal_L22e7pwoP21 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
MA [auth N2]Ribosomal_L15ee7pwoN21 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
KA [auth L2]Ribosomal_L13ee7pwoL21 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
HA [auth H2]Ribosomal_L6_2e7pwoH21 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
HA [auth H2]Ribosomal_L6e7pwoH22 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
FA [auth F2]Ribosomal_L30_1e7pwoF21 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
CA [auth B2]Ribosomal_L3e7pwoB21 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
BA [auth A2]Ribosomal_L2_1e7pwoA21 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
BA [auth A2]Ribosomal_L2_C_2e7pwoA22 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
W [auth L1]Ribosomal_S17_1e7pwoL11 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
U [auth W1]Ribosomal_S8_N_1e7pwoW11 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
U [auth W1]Ribosomal_S8_C_1e7pwoW12 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
T [auth O1]Ribosomal_S11e7pwoO11 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
B [auth N1]Ribosomal_S13_N_1e7pwoN11 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_N_1ECOD (1.6)
B [auth N1]Ribosomal_S15_2e7pwoN12 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
Q [auth H1]Ribosomal_S7e_Ne7pwoH12 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
Q [auth H1]Ribosomal_S7e_C_1e7pwoH11 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_1ECOD (1.6)
O [auth I1]Ribosomal_S8ee7pwoI11 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
K [auth a1]Ribosomal_S26ee7pwoa11 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
A [auth T1]Ribosomal_S19ee7pwoT11 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth J1]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
C [auth J1]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
D [auth D1]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
E [auth X1]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
F [auth S1]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
G [auth Q1]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
L [auth V1]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
N [auth K1]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. Domain
V [auth E1]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
V [auth E1]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
V [auth E1]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. Domain
X [auth U1]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
DA [auth C2]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins. Domain
DA [auth C2]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
DA [auth C2]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
EA [auth D2]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
EA [auth D2]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
EA [auth D2]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins. Domain
IA [auth I2]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
IA [auth I2]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
JA [auth J2]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
JA [auth J2]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
JA [auth J2]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
LA [auth M2]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e familyBovine L40 has been identified as a secondary RNA binding protein [1]. L40 is fused to a ubiquitin protein [2]. Domain
LA [auth M2]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
NA [auth O2]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
NA [auth O2]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
PA [auth Q2]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
QA [auth R2]PF01280Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)Ribosomal protein L19e, N-terminal domainThis domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
UA [auth V2]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
VA [auth X2]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
RB [auth F1]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
SB [auth Y1]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
TB [auth G1]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
H [auth C1]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
H [auth C1]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28eDomain
H [auth C1]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
VB [auth A1]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
VB [auth A1]PF01283Ribosomal protein S26e (Ribosomal_S26e)Ribosomal protein S26e- Family
OB [auth W2]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
XA [auth Z2]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
XA [auth Z2]PF00467KOW motif (KOW)KOW motif- Family
WA [auth Y2]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
OA [auth P2]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
OA [auth P2]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
MA [auth N2]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
KA [auth L2]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
HA [auth H2]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
FA [auth F2]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
FA [auth F2]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35AeThis entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. Domain
CA [auth B2]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
BA [auth A2]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
BA [auth A2]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
BA [auth A2]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
W [auth L1]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
W [auth L1]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
U [auth W1]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
T [auth O1]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
B [auth N1]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
B [auth N1]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1]. Domain
B [auth N1]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
Q [auth H1]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
O [auth I1]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
A [auth T1]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth J1]Ribosomal protein S9
D [auth D1]Ribosomal protein S3
E [auth X1]Ribosomal protein S23
F [auth S1]Ribosomal protein S18
G [auth Q1]Ribosomal protein S16
I [auth B1]40S ribosomal protein S3a
J [auth b1]Ribosomal protein S27---
L [auth V1]40S ribosomal protein S21
M [auth R1]Ribosomal protein S17
N [auth K1]Ribosomal protein S10B -
P [auth e1]40S ribosomal protein S30
R [auth n1]Ribosomal protein eL41
S [auth c1]Ribosomal protein S28
V [auth E1]40S ribosomal protein S4
X [auth U1]Ribosomal protein S20
AA [auth 42]rRNA 5.8S---
DA [auth C2]Ribosomal protein L4
EA [auth D2]Ribosomal protein L5
GA [auth G2]60S ribosomal protein L7a
IA [auth I2]Ribosomal protein L10
JA [auth J2]Ribosomal protein L11
LA [auth M2]Ribosomal protein L14
NA [auth O2]Ribosomal protein L13a
PA [auth Q2]Ribosomal protein L18
QA [auth R2]Ribosomal protein L19
UA [auth V2]Ribosomal protein L23
VA [auth X2]Ribosomal protein L23A
ZA [auth b2]60S ribosomal protein L29
AB [auth c2]Ribosomal protein L30 -
BB [auth d2]Ribosomal protein L31B
CB [auth e2]Ribosomal protein L32
EB [auth g2]Ribosomal protein L34
FB [auth h2]Ribosomal protein L35---
IB [auth k2]Ribosomal L38e
JB [auth l2]Ribosomal protein L39
KB [auth m2]Ubiquitin/Ribosomal protein L40e
LB [auth o2]Ribosomal protein L44
QB [auth d1]Ribosomal protein S29A---
RB [auth F1]Ribosomal protein S5
SB [auth Y1]Ribosomal protein S24
TB [auth G1]40S ribosomal protein S6
H [auth C1]Ribosomal protein S2
VB [auth A1]40S ribosomal protein SA
UB [auth 2]rRNA 18S---
PB [auth E]P-site tRNA---
OB [auth W2]Ribosomal protein L24A-
NB [auth w2]E-site tRNA---
MB [auth p2]Ribosomal protein L37a
HB [auth j2]Ribosomal protein L37
GB [auth i2]Ribosomal protein L36-1
DB [auth f2]Ribosomal protein L35a
YA [auth a2]Ribosomal protein L27a
XA [auth Z2]60S ribosomal protein L27
WA [auth Y2]Ribosomal protein L26
TA [auth U2]Ribosomal protein eL22---
SA [auth T2]Ribosomal protein L21
RA [auth S2]60S ribosomal protein L18a---
OA [auth P2]Ribosomal protein L17
MA [auth N2]Ribosomal protein L15
KA [auth L2]60S ribosomal protein L13---
HA [auth H2]Ribosomal protein L6
FA [auth F2]Ribosomal protein L7
CA [auth B2]Ribosomal protein L3
BA [auth A2]Ribosomal protein L2
Z [auth 3]rRNA 5S---
Y [auth 1]rRNA 28S---
W [auth L1]SSU ribosomal protein S17P
U [auth W1]Ribosomal protein S15A
T [auth O1]Ribosomal protein S14
B [auth N1]Ribosomal protein S13
Q [auth H1]40S ribosomal protein S7
O [auth I1]40S ribosomal protein S8
K [auth a1]40S ribosomal protein S26
A [auth T1]Ribosomal protein S19e

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth J1]IPR002942RNA-binding S4 domainDomain
C [auth J1]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
C [auth J1]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
C [auth J1]IPR022801Small ribosomal subunit protein uS4Family
C [auth J1]IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
D [auth D1]IPR005703Small ribosomal subunit protein uS3, eukaryota/archaealFamily
D [auth D1]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
D [auth D1]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
D [auth D1]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
D [auth D1]IPR057258Small ribosomal subunit protein uS3Family
D [auth D1]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
E [auth X1]IPR006032Small ribosomal subunit protein uS12Family
E [auth X1]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
E [auth X1]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
F [auth S1]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
F [auth S1]IPR001892Small ribosomal subunit protein uS13Family
F [auth S1]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
F [auth S1]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
G [auth Q1]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
G [auth Q1]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
G [auth Q1]IPR000754Small ribosomal subunit protein uS9Family
G [auth Q1]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
I [auth B1]IPR001593Small ribosomal subunit protein eS1Family
I [auth B1]IPR027500Small ribosomal subunit protein eS1, eukaryotaFamily
L [auth V1]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
L [auth V1]IPR001931Small ribosomal subunit protein eS21Family
M [auth R1]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
M [auth R1]IPR001210Small ribosomal subunit protein eS17Family
N [auth K1]IPR037447Small ribosomal subunit protein eS10Family
N [auth K1]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
N [auth K1]IPR005326Plectin/eS10, N-terminalDomain
P [auth e1]IPR006846Small ribosomal subunit protein eS30Family
R [auth n1]IPR007836Large ribosomal subunit protein eS32Family
S [auth c1]IPR028626Ribosomal protein eS28 conserved siteConserved Site
S [auth c1]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
S [auth c1]IPR000289Small ribosomal subunit protein eS28Family
V [auth E1]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
V [auth E1]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
V [auth E1]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
V [auth E1]IPR013845Small ribosomal subunit protein eS4, central regionDomain
V [auth E1]IPR000876Small ribosomal subunit protein eS4Family
V [auth E1]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
V [auth E1]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
V [auth E1]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
V [auth E1]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
V [auth E1]IPR005824KOWDomain
X [auth U1]IPR001848Small ribosomal subunit protein uS10Family
X [auth U1]IPR027486Small ribosomal subunit protein uS10 domainDomain
X [auth U1]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
DA [auth C2]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
DA [auth C2]IPR002136Large ribosomal subunit protein uL4Family
DA [auth C2]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
DA [auth C2]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
DA [auth C2]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
EA [auth D2]IPR057268Large ribosomal subunit protein uL18Family
EA [auth D2]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
EA [auth D2]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
GA [auth G2]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
GA [auth G2]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
GA [auth G2]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
GA [auth G2]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
GA [auth G2]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
IA [auth I2]IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
IA [auth I2]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
IA [auth I2]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
IA [auth I2]IPR016180Large ribosomal subunit protein uL16 domainDomain
IA [auth I2]IPR047873Large ribosomal subunit protein uL16Family
JA [auth J2]IPR057266Large ribosomal subunit protein uL5, eukaryota/archaeaFamily
JA [auth J2]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
JA [auth J2]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
JA [auth J2]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
JA [auth J2]IPR002132Large ribosomal subunit protein uL5Family
LA [auth M2]IPR039660Large ribosomal subunit protein eL14Family
LA [auth M2]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
LA [auth M2]IPR002784Large ribosomal subunit protein eL14 domainDomain
LA [auth M2]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
NA [auth O2]IPR005822Large ribosomal subunit protein uL13Family
NA [auth O2]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
NA [auth O2]IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily
PA [auth Q2]IPR021131Large ribosomal subunit protein uL15/eL18Domain
PA [auth Q2]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
PA [auth Q2]IPR000039Large ribosomal subunit protein eL18Family
PA [auth Q2]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
QA [auth R2]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
QA [auth R2]IPR057259Ribosomal protein L19e, N-terminal domainDomain
QA [auth R2]IPR039547Large ribosomal subunit protein eL19Family
QA [auth R2]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
QA [auth R2]IPR057260Ribosomal protein L19e, C-terminal domainDomain
QA [auth R2]IPR000196Large ribosomal subunit protein eL19 domainDomain
UA [auth V2]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
UA [auth V2]IPR000218Large ribosomal subunit protein uL14Family
UA [auth V2]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
VA [auth X2]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
VA [auth X2]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
VA [auth X2]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
VA [auth X2]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
VA [auth X2]IPR013025Large ribosomal subunit protein uL23-likeFamily
ZA [auth b2]IPR002673Large ribosomal subunit protein eL29Family
AB [auth c2]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
AB [auth c2]IPR039109Large ribosomal subunit protein eL30-likeFamily
AB [auth c2]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
BB [auth d2]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
BB [auth d2]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
BB [auth d2]IPR000054Large ribosomal subunit protein eL31Family
CB [auth e2]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
CB [auth e2]IPR001515Large ribosomal subunit protein eL32Family
CB [auth e2]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
EB [auth g2]IPR008195Large ribosomal subunit protein eL34Family
EB [auth g2]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
IB [auth k2]IPR002675Large ribosomal subunit protein eL38Family
IB [auth k2]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
JB [auth l2]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
JB [auth l2]IPR000077Large ribosomal subunit protein eL39Family
KB [auth m2]IPR023657Large ribosomal subunit protein eL40, archaeaFamily
KB [auth m2]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
KB [auth m2]IPR000626Ubiquitin-like domainDomain
KB [auth m2]IPR001975Large ribosomal subunit protein eL40 domainDomain
KB [auth m2]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
KB [auth m2]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
LB [auth o2]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
LB [auth o2]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
LB [auth o2]IPR000552Large ribosomal subunit protein eL42Family
RB [auth F1]IPR000235Small ribosomal subunit protein uS7Family
RB [auth F1]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
RB [auth F1]IPR023798Small ribosomal subunit protein uS7 domainDomain
RB [auth F1]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
SB [auth Y1]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
SB [auth Y1]IPR001976Small ribosomal subunit protein eS24Family
SB [auth Y1]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
TB [auth G1]IPR014401Small ribosomal subunit protein eS6-likeFamily
TB [auth G1]IPR001377Small ribosomal subunit protein eS6Family
TB [auth G1]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
H [auth C1]IPR005711Small ribosomal subunit protein uS5, eukaryota_archaeaFamily
H [auth C1]IPR000851Small ribosomal subunit protein uS5Family
H [auth C1]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
H [auth C1]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
H [auth C1]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
H [auth C1]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
H [auth C1]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
VB [auth A1]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
VB [auth A1]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
VB [auth A1]IPR001865Small ribosomal subunit protein uS2Family
VB [auth A1]IPR005707Small ribosomal subunit protein uS2, eukaryota/archaeaFamily
VB [auth A1]IPR027498Small ribosomal subunit protein uS2, eukaryotaFamily
OB [auth W2]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
OB [auth W2]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
MB [auth p2]IPR002674Large ribosomal subunit protein eL43Family
MB [auth p2]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
MB [auth p2]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
MB [auth p2]IPR050522Eukaryotic ribosomal protein eL43Family
HB [auth j2]IPR001569Large ribosomal subunit protein eL37Family
HB [auth j2]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
HB [auth j2]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HB [auth j2]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
GB [auth i2]IPR000509Large ribosomal subunit protein eL36Family
GB [auth i2]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
DB [auth f2]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
DB [auth f2]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
DB [auth f2]IPR001780Large ribosomal subunit protein eL33Family
DB [auth f2]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
YA [auth a2]IPR021131Large ribosomal subunit protein uL15/eL18Domain
YA [auth a2]IPR030878Large ribosomal subunit protein uL15Family
YA [auth a2]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
YA [auth a2]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
XA [auth Z2]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
XA [auth Z2]IPR005824KOWDomain
XA [auth Z2]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
XA [auth Z2]IPR001141Large ribosomal subunit protein eL27Family
XA [auth Z2]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
WA [auth Y2]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
WA [auth Y2]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
WA [auth Y2]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
WA [auth Y2]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
SA [auth T2]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
SA [auth T2]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
SA [auth T2]IPR001147Large ribosomal subunit protein eL21Family
SA [auth T2]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
OA [auth P2]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
OA [auth P2]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
OA [auth P2]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
OA [auth P2]IPR001063Large ribosomal subunit protein uL22Family
MA [auth N2]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
MA [auth N2]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
MA [auth N2]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
MA [auth N2]IPR000439Large ribosomal subunit protein eL15Family
HA [auth H2]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
HA [auth H2]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
HA [auth H2]IPR000702Large ribosomal subunit protein uL6-likeFamily
FA [auth F2]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
FA [auth F2]IPR039699Large ribosomal subunit protein uL30Family
FA [auth F2]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
FA [auth F2]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
CA [auth B2]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
CA [auth B2]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
CA [auth B2]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
CA [auth B2]IPR000597Large ribosomal subunit protein uL3Family
CA [auth B2]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
BA [auth A2]IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
BA [auth A2]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
BA [auth A2]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
BA [auth A2]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BA [auth A2]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
BA [auth A2]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
BA [auth A2]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
BA [auth A2]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
BA [auth A2]IPR002171Large ribosomal subunit protein uL2Family
W [auth L1]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
W [auth L1]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
W [auth L1]IPR000266Small ribosomal subunit protein uS17Family
W [auth L1]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
W [auth L1]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
U [auth W1]IPR000630Small ribosomal subunit protein uS8Family
U [auth W1]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
T [auth O1]IPR001971Small ribosomal subunit protein uS11Family
T [auth O1]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
T [auth O1]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
B [auth N1]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
B [auth N1]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
B [auth N1]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
B [auth N1]IPR000589Small ribosomal subunit protein uS15Family
Q [auth H1]IPR000554Small ribosomal subunit protein eS7Family
O [auth I1]IPR001047Small ribosomal subunit protein eS8Family
O [auth I1]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
K [auth a1]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
K [auth a1]IPR000892Small ribosomal subunit protein eS26Family
A [auth T1]IPR001266Small ribosomal subunit protein eS19Family
A [auth T1]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
A [auth T1]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily