7QV7 | pdb_00007qv7

Cryo-EM structure of Hydrogen-dependent CO2 reductase.


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
L [auth S]V-sete7qv7S1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
O [auth Y]V-sete7qv7Y1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
DFe_hyd_SSUe7qv7D1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Fe_hyd_SSUECOD (develop294)
DV-sete7qv7D3 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
G [auth K]V-sete7qv7K1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
J [auth Q]V-sete7qv7Q1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
K [auth R]V-sete7qv7R1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
M [auth V]V-sete7qv7V1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
P [auth Z]V-sete7qv7Z1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
BV-sete7qv7B1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
F [auth J]V-sete7qv7J1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
H [auth N]V-sete7qv7N1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
I [auth P]V-sete7qv7P1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
N [auth X]V-sete7qv7X1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
CV-sete7qv7C1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
AFe_hyd_SSUe7qv7A1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Fe_hyd_SSUECOD (develop294)
E [auth G]Fe_hyd_SSUe7qv7G1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Fe_hyd_SSUECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
L [auth S]3.40.228.10 Alpha Beta 3-Layer(aba) Sandwich Dimethylsulfoxide Reductase domain 2CATH (utative)
O [auth Y]3.40.228.10 Alpha Beta 3-Layer(aba) Sandwich Dimethylsulfoxide Reductase domain 2CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
L [auth S],
O [auth Y]
Hydrogen dependent carbon dioxide reductase subunit FdhF
Hydrogen dependent carbon dioxide reductase subunit HydA2 - -
Hydrogen dependent carbon dioxide reductase subunit HycB4 - -
A,
E [auth G]
Hydrogen dependent carbon dioxide reductase subunit HycB3 - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
L [auth S],
O [auth Y]
IPR006963Molybdopterin oxidoreductase, 4Fe-4S domainDomain
L [auth S],
O [auth Y]
IPR006657Molybdopterin dinucleotide-binding domainDomain
L [auth S],
O [auth Y]
IPR006656Molybdopterin oxidoreductaseDomain
L [auth S],
O [auth Y]
IPR009010Aspartate decarboxylase-like domain superfamilyHomologous Superfamily
L [auth S],
O [auth Y]
IPR050123Prok_molybdopt-oxidoreductaseUnknown
L [auth S],
O [auth Y]
IPR041924Formate dehydrogenase H, N-terminalDomain
L [auth S],
O [auth Y]
IPR027467Molybdopterin oxidoreductase, molybdopterin cofactor binding siteBinding Site
L [auth S],
O [auth Y]
IPR041925Formate dehydrogenase H, molybdopterin-binding domainDomain
L [auth S],
O [auth Y]
IPR006478Formate dehydrogenase, alpha subunitFamily
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
IPR004108Iron hydrogenase, large subunit, C-terminalDomain
IPR036991Iron hydrogenase, small subunit superfamilyHomologous Superfamily
IPR050340Cytosolic Fe-S Cluster Assembly FactorFamily
IPR009016Iron hydrogenaseHomologous Superfamily
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
IPR013352Iron hydrogenase, subsetDomain
IPR003149Iron hydrogenase, small subunitDomain
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
IPR050294Ion-translocating oxidoreductase complex subunit BFamily
A,
E [auth G]
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
A,
E [auth G]
IPR050294Ion-translocating oxidoreductase complex subunit BFamily