7UA4

Structure of PKA phosphorylated human RyR2-R2474S in the open state in the presence of Calmodulin

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth E]SCOP2B SuperfamilyRotamase-like8034864 3000622 SCOP2B (2022-06-29)
C [auth F]SCOP2B SuperfamilyRotamase-like8034864 3000622 SCOP2B (2022-06-29)
D [auth G]SCOP2B SuperfamilyRotamase-like8034864 3000622 SCOP2B (2022-06-29)
E [auth H]SCOP2B SuperfamilyRotamase-like8034864 3000622 SCOP2B (2022-06-29)
F [auth I]SCOP2B SuperfamilyEF-hand8033438 3001983 SCOP2B (2022-06-29)
G [auth J]SCOP2B SuperfamilyEF-hand8033438 3001983 SCOP2B (2022-06-29)
H [auth K]SCOP2B SuperfamilyEF-hand8033438 3001983 SCOP2B (2022-06-29)
I [auth L]SCOP2B SuperfamilyEF-hand8033438 3001983 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth E]FKBP_Ce7ua4E1 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: FKBP_CECOD (1.6)
C [auth F]FKBP_Ce7ua4F1 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: FKBP_CECOD (1.6)
D [auth G]FKBP_Ce7ua4G1 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: FKBP_CECOD (1.6)
E [auth H]FKBP_Ce7ua4H1 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: FKBP_CECOD (1.6)
F [auth I]EF-hand_7_8e7ua4I1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_8ECOD (1.6)
F [auth I]EF-hand_7_5e7ua4I2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_5ECOD (1.6)
G [auth J]EF-hand_7_8e7ua4J2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_8ECOD (1.6)
G [auth J]EF-hand_7_5e7ua4J1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_5ECOD (1.6)
H [auth K]EF-hand_7_8e7ua4K1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_8ECOD (1.6)
H [auth K]EF-hand_7_5e7ua4K2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_5ECOD (1.6)
I [auth L]EF-hand_7_8e7ua4L1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_8ECOD (1.6)
I [auth L]EF-hand_7_5e7ua4L2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_5ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
J [auth B],
K [auth C],
L [auth D]		PF00622SPRY domain (SPRY)SPRY domain- Family
A,
J [auth B],
K [auth C],
L [auth D]		PF08454RyR and IP3R Homology associated (RIH_assoc)RyR and IP3R Homology associated- Repeat
A,
J [auth B],
K [auth C],
L [auth D]		PF02815MIR domain (MIR)MIR domainThe MIR (protein mannosyltransferase, IP3R and RyR) domain is a domain that may have a ligand transferase function [1].Domain
A,
J [auth B],
K [auth C],
L [auth D]		PF08709Inositol 1,4,5-trisphosphate/ryanodine receptor (Ins145_P3_rec)Inositol 1,4,5-trisphosphate/ryanodine receptorThis domain corresponds to the ligand binding region on inositol 1,4,5-trisphosphate receptor, and the N terminal region of the ryanodine receptor. Both receptors are involved in Ca2+ release. They can couple to the activation of neurotransmitter-ga ...This domain corresponds to the ligand binding region on inositol 1,4,5-trisphosphate receptor, and the N terminal region of the ryanodine receptor. Both receptors are involved in Ca2+ release. They can couple to the activation of neurotransmitter-gated receptors and voltage-gated Ca2+ channels on the plasma membrane, thus allowing the endoplasmic reticulum discriminate between different types of neuronal activity [1].
Domain
A,
J [auth B],
K [auth C],
L [auth D]		PF21119Ryanodine receptor junctional solenoid repeat (RYDR_Jsol)Ryanodine receptor junctional solenoid repeatThis entry represents a region of the Ryanodine receptor composed of alpha helical ARM repeats [1]. This region has been termed the Junctional solenoid region (Jsol) [1].Domain
A,
J [auth B],
K [auth C],
L [auth D]		PF01365RIH domain (RYDR_ITPR)RIH domain- Repeat
A,
J [auth B],
K [auth C],
L [auth D]		PF02026RyR domain (RyR)RyR domain- Family
A,
J [auth B],
K [auth C],
L [auth D]		PF00520Ion transport protein (Ion_trans)Ion transport protein- Family
B [auth E],
C [auth F],
D [auth G],
E [auth H]		PF00254FKBP-type peptidyl-prolyl cis-trans isomerase (FKBP_C)FKBP-type peptidyl-prolyl cis-trans isomerase- Domain
F [auth I],
G [auth J],
H [auth K],
I [auth L]		PF13499EF-hand domain pair (EF-hand_7)EF-hand domain pair- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
J [auth B],
K [auth C],
L [auth D]		Ryanodine receptor 2
B [auth E],
C [auth F],
D [auth G],
E [auth H]		Peptidyl-prolyl cis-trans isomerase FKBP1B
F [auth I],
G [auth J],
H [auth K],
I [auth L]		Calmodulin-1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
J [auth B],
K [auth C],
L [auth D]		IPR036300Mir domain superfamilyHomologous Superfamily
A,
J [auth B],
K [auth C],
L [auth D]		IPR000699RIH domainDomain
A,
J [auth B],
K [auth C],
L [auth D]		IPR013662RyR/IP3R Homology associated domainDomain
A,
J [auth B],
K [auth C],
L [auth D]		IPR016093MIR motifDomain
A,
J [auth B],
K [auth C],
L [auth D]		IPR013320Concanavalin A-like lectin/glucanase domain superfamilyHomologous Superfamily
A,
J [auth B],
K [auth C],
L [auth D]		IPR002048EF-hand domainDomain
A,
J [auth B],
K [auth C],
L [auth D]		IPR003877SPRY domainDomain
A,
J [auth B],
K [auth C],
L [auth D]		IPR001870B30.2/SPRY domainDomain
A,
J [auth B],
K [auth C],
L [auth D]		IPR009460Ryanodine Receptor TM 4-6Domain
A,
J [auth B],
K [auth C],
L [auth D]		IPR015925Ryanodine/Inositol 1,4,5-trisphosphate receptorFamily
A,
J [auth B],
K [auth C],
L [auth D]		IPR048581Ryanodine receptor, junctional solenoid domainDomain
A,
J [auth B],
K [auth C],
L [auth D]		IPR035910RyR/IP3 receptor binding core, RIH domain superfamilyHomologous Superfamily
A,
J [auth B],
K [auth C],
L [auth D]		IPR003032Ryanodine receptor RyrDomain
A,
J [auth B],
K [auth C],
L [auth D]		IPR035761Ryanodine receptor, SPRY domain 1Domain
A,
J [auth B],
K [auth C],
L [auth D]		IPR014821Inositol 1,4,5-trisphosphate/ryanodine receptorDomain
A,
J [auth B],
K [auth C],
L [auth D]		IPR035764Ryanodine receptor, SPRY domain 2Domain
A,
J [auth B],
K [auth C],
L [auth D]		IPR013333Ryanodine receptorFamily
A,
J [auth B],
K [auth C],
L [auth D]		IPR043136B30.2/SPRY domain superfamilyHomologous Superfamily
A,
J [auth B],
K [auth C],
L [auth D]		IPR011992EF-hand domain pairHomologous Superfamily
A,
J [auth B],
K [auth C],
L [auth D]		IPR005821Ion transport domainDomain
A,
J [auth B],
K [auth C],
L [auth D]		IPR035762Ryanodine receptor, SPRY domain 3Domain
B [auth E],
C [auth F],
D [auth G],
E [auth H]		IPR046357Peptidyl-prolyl cis-trans isomerase domain superfamilyHomologous Superfamily
B [auth E],
C [auth F],
D [auth G],
E [auth H]		IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainDomain
F [auth I],
G [auth J],
H [auth K],
I [auth L]		IPR002048EF-hand domainDomain
F [auth I],
G [auth J],
H [auth K],
I [auth L]		IPR018247EF-Hand 1, calcium-binding siteBinding Site
F [auth I],
G [auth J],
H [auth K],
I [auth L]		IPR011992EF-hand domain pairHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A,
J [auth B],
K [auth C],
L [auth D]		Pharos:  Q92736
B [auth E],
C [auth F],
D [auth G],
E [auth H]		Pharos:  P68106
F [auth I],
G [auth J],
H [auth K],
I [auth L]		Pharos:  P0DP23

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
mpstrucTRANSMEMBRANE PROTEINS: ALPHA-HELICALChannels: Calcium Ion-SelectiveRyR2 ryanodine receptor, PKA phosphorylated in the closed state