7UWS | pdb_00007uws

Atomic model of the partial VSV nucleocapsid


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
GSCOP2B SuperfamilyRhabdovirus nucleoprotein-like 8041903 3001763 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRhabdovirus nucleoprotein-like 8041903 3001763 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyRhabdovirus nucleoprotein-like 8041903 3001763 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyRhabdovirus nucleoprotein-like 8041903 3001763 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRhabdovirus nucleoprotein-like 8041903 3001763 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRhabdovirus nucleoprotein-like 8041903 3001763 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyRhabdovirus nucleoprotein-like 8041903 3001763 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
T [auth U]Gp23e7uwsU1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Gp23ECOD (develop294)
S [auth T]Gp23e7uwsT1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Gp23ECOD (develop294)
R [auth S]Gp23e7uwsS1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Gp23ECOD (develop294)
Q [auth R]Gp23e7uwsR1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Gp23ECOD (develop294)
P [auth Q]Gp23e7uwsQ1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Gp23ECOD (develop294)
O [auth P]Gp23e7uwsP1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Gp23ECOD (develop294)
N [auth O]Gp23e7uwsO1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Gp23ECOD (develop294)
M [auth N]Gp23e7uwsN1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Gp23ECOD (develop294)
L [auth M]Rnf-Nqre7uwsM1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Rnf-NqrECOD (develop294)
K [auth L]Gp23e7uwsL1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Gp23ECOD (develop294)
J [auth K]Gp23e7uwsK1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Gp23ECOD (develop294)
I [auth J]Gp23e7uwsJ1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Gp23ECOD (develop294)
GGp23e7uwsG1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Gp23ECOD (develop294)
FGp23e7uwsF1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Gp23ECOD (develop294)
EGp23e7uwsE1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Gp23ECOD (develop294)
DGp23e7uwsD1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Gp23ECOD (develop294)
CRnf-Nqre7uwsC1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Rnf-NqrECOD (develop294)
BRnf-Nqre7uwsB1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Rnf-NqrECOD (develop294)
AGp23e7uwsA1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Gp23ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
G1.10.3570.10 Mainly Alpha Orthogonal Bundle Rhabdovirus nucleoprotein-like fold Rhabdovirus nucleocapsid protein like domainCATH (utative)
F1.10.3570.10 Mainly Alpha Orthogonal Bundle Rhabdovirus nucleoprotein-like fold Rhabdovirus nucleocapsid protein like domainCATH (utative)
F1.10.3610.10 Mainly Alpha Orthogonal Bundle Rhabdovirus nucleoprotein-like NucleoproteinCATH (utative)
E1.10.3570.10 Mainly Alpha Orthogonal Bundle Rhabdovirus nucleoprotein-like fold Rhabdovirus nucleocapsid protein like domainCATH (utative)
E1.10.3610.10 Mainly Alpha Orthogonal Bundle Rhabdovirus nucleoprotein-like NucleoproteinCATH (utative)
D1.10.3570.10 Mainly Alpha Orthogonal Bundle Rhabdovirus nucleoprotein-like fold Rhabdovirus nucleocapsid protein like domainCATH (utative)
C1.10.3570.10 Mainly Alpha Orthogonal Bundle Rhabdovirus nucleoprotein-like fold Rhabdovirus nucleocapsid protein like domainCATH (utative)
C1.10.3610.10 Mainly Alpha Orthogonal Bundle Rhabdovirus nucleoprotein-like NucleoproteinCATH (utative)
B1.10.3570.10 Mainly Alpha Orthogonal Bundle Rhabdovirus nucleoprotein-like fold Rhabdovirus nucleocapsid protein like domainCATH (utative)
B1.10.3610.10 Mainly Alpha Orthogonal Bundle Rhabdovirus nucleoprotein-like NucleoproteinCATH (utative)
A1.10.3570.10 Mainly Alpha Orthogonal Bundle Rhabdovirus nucleoprotein-like fold Rhabdovirus nucleocapsid protein like domainCATH (utative)
A1.10.3610.10 Mainly Alpha Orthogonal Bundle Rhabdovirus nucleoprotein-like NucleoproteinCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00945Rhabdovirus nucleocapsid protein (Rhabdo_ncap)Rhabdovirus nucleocapsid protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Matrix protein
RNA---
A, B, C, D, E
Nucleoprotein