Rba sphaeroides PufY-KO RC-LH1 dimer type-2
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| S [auth C] | SCOP2B Superfamily | PufX membrane protein-like | 8092158 | 3002563 | SCOP2B (2022-06-29) |
| YA [auth c] | SCOP2B Superfamily | PufX membrane protein-like | 8092158 | 3002563 | SCOP2B (2022-06-29) |
| E [auth B] | SCOP2B Superfamily | Light-harvesting complex subunits | 8076353 | 3000199 | SCOP2B (2022-06-29) |
| G [auth E] | SCOP2B Superfamily | Light-harvesting complex subunits | 8076353 | 3000199 | SCOP2B (2022-06-29) |
| K [auth J] | SCOP2B Superfamily | Light-harvesting complex subunits | 8076353 | 3000199 | SCOP2B (2022-06-29) |
| LA [auth t] | SCOP2B Superfamily | Light-harvesting complex subunits | 8076353 | 3000199 | SCOP2B (2022-06-29) |
| PA [auth x] | SCOP2B Superfamily | Light-harvesting complex subunits | 8076353 | 3000199 | SCOP2B (2022-06-29) |
| X [auth b] | SCOP2B Superfamily | Light-harvesting complex subunits | 8076353 | 3000199 | SCOP2B (2022-06-29) |
| Z [auth e] | SCOP2B Superfamily | Light-harvesting complex subunits | 8076353 | 3000199 | SCOP2B (2022-06-29) |
| XA [auth ab] | SCOP2B Superfamily | Light-harvesting complex subunits | 8076353 | 3000199 | SCOP2B (2022-06-29) |
| VA [auth aa] | SCOP2B Superfamily | Light-harvesting complex subunits | 8076353 | 3000199 | SCOP2B (2022-06-29) |
| R [auth 0] | SCOP2B Superfamily | Light-harvesting complex subunits | 8076353 | 3000199 | SCOP2B (2022-06-29) |
| P [auth 8] | SCOP2B Superfamily | Light-harvesting complex subunits | 8076353 | 3000199 | SCOP2B (2022-06-29) |
| JA [auth r] | SCOP2B Superfamily | Light-harvesting complex subunits | 8076353 | 3000199 | SCOP2B (2022-06-29) |
| I [auth G] | SCOP2B Superfamily | Light-harvesting complex subunits | 8076353 | 3000199 | SCOP2B (2022-06-29) |
| DA [auth j] | SCOP2B Superfamily | Light-harvesting complex subunits | 8076353 | 3000199 | SCOP2B (2022-06-29) |
| BA [auth g] | SCOP2B Superfamily | Light-harvesting complex subunits | 8076353 | 3000199 | SCOP2B (2022-06-29) |
| C [auth H] | SCOP2B Superfamily | PRC-barrel domain | 8099396 | 3000637 | SCOP2B (2022-06-29) |
| C [auth H] | SCOP2B Superfamily | Photosystem II reaction centre subunit H, transmembrane region | 8100956 | 3000750 | SCOP2B (2022-06-29) |
| V [auth h] | SCOP2B Superfamily | Photosystem II reaction centre subunit H, transmembrane region | 8100956 | 3000750 | SCOP2B (2022-06-29) |
| V [auth h] | SCOP2B Superfamily | PRC-barrel domain | 8099396 | 3000637 | SCOP2B (2022-06-29) |
| B [auth M] | SCOP2B Superfamily | Bacterial photosystem II reaction centre, L and M subunits | 8099400 | 3000736 | SCOP2B (2022-06-29) |
| U [auth m] | SCOP2B Superfamily | Bacterial photosystem II reaction centre, L and M subunits | 8099400 | 3000736 | SCOP2B (2022-06-29) |
| A [auth L] | SCOP2B Superfamily | Bacterial photosystem II reaction centre, L and M subunits | 8099398 | 3000736 | SCOP2B (2022-06-29) |
| T [auth l] | SCOP2B Superfamily | Bacterial photosystem II reaction centre, L and M subunits | 8099398 | 3000736 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| S [auth C] | e7vb9C1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| YA [auth c] | e7vb9c1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| E [auth B] | e7vb9B1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| FA [auth n] | e7vb9n1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| G [auth E] | e7vb9E1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| K [auth J] | e7vb9J1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| LA [auth t] | e7vb9t1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| PA [auth x] | e7vb9x1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| X [auth b] | e7vb9b1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| Z [auth e] | e7vb9e1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| XA [auth ab] | e7vb9ab1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| VA [auth aa] | e7vb9aa1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| TA [auth 4] | e7vb941 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| RA [auth z] | e7vb9z1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| R [auth 0] | e7vb901 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| P [auth 8] | e7vb981 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| NA [auth v] | e7vb9v1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| M [auth N] | e7vb9N1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| JA [auth r] | e7vb9r1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| I [auth G] | e7vb9G1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| HA [auth p] | e7vb9p1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| DA [auth j] | e7vb9j1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| BA [auth g] | e7vb9g1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| CA [auth i] | e7vb9i1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| EA [auth k] | e7vb9k1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| GA [auth o] | e7vb9o1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| H [auth F] | e7vb9F1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| J [auth I] | e7vb9I1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| MA [auth u] | e7vb9u1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| Q [auth 9] | e7vb991 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| SA [auth 5] | e7vb951 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| UA [auth 6] | e7vb961 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| W [auth a] | e7vb9a1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| WA [auth Q] | e7vb9Q1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| Y [auth d] | e7vb9d1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| QA [auth y] | e7vb9y1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| OA [auth w] | e7vb9w1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| O [auth 7] | e7vb971 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| N [auth O] | e7vb9O1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| L [auth K] | e7vb9K1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| KA [auth s] | e7vb9s1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| IA [auth q] | e7vb9q1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| F [auth D] | e7vb9D1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| D [auth A] | e7vb9A1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| AA [auth f] | e7vb9f1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| C [auth H] | e7vb9H1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| V [auth h] | e7vb9h1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| B [auth M] | e7vb9M1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| U [auth m] | e7vb9m1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| A [auth L] | e7vb9L1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| T [auth l] | e7vb9l1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| S [auth C], YA [auth c] | PF11511 | Intrinsic membrane protein PufX (RhodobacterPufX) | Intrinsic membrane protein PufX | - | Family |
| PF00556 | Antenna complex alpha/beta subunit (LHC) | Antenna complex alpha/beta subunit | Domain | ||
| PF00556 | Antenna complex alpha/beta subunit (LHC) | Antenna complex alpha/beta subunit | Domain | ||
| C [auth H], V [auth h] | PF03967 | Photosynthetic reaction centre, H-chain N-terminal region (PRCH) | Photosynthetic reaction centre, H-chain N-terminal region | - | Family |
| C [auth H], V [auth h] | PF05239 | PRC-barrel domain (PRC) | PRC-barrel domain | The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, ... | Domain |
| B [auth M], U [auth m] | PF00124 | Photosynthetic reaction centre protein (Photo_RC) | Photosynthetic reaction centre protein | - | Family |
| A [auth L], T [auth l] | PF00124 | Photosynthetic reaction centre protein (Photo_RC) | Photosynthetic reaction centre protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Photosystems | Bacterial photosystems |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Light-Harvesting+Reaction Center Complexes | LH1-RC super complex dimer, in class 1 |














