7VJQ | pdb_00007vjq

Pectobacterium phage ZF40 apo-aca2 complexed with 26bp DNA substrate


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ADUF1870e7vjqA1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: DUF1870ECOD (1.6)
BDUF1870e7vjqB1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: DUF1870ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.3100.10 Mainly Alpha Orthogonal Bundle Putative cytoplasmic protein Putative cytoplasmic proteinCATH (utative)
B1.10.3100.10 Mainly Alpha Orthogonal Bundle Putative cytoplasmic protein Putative cytoplasmic proteinCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF08965Domain of unknown function (DUF1870) (DUF1870)Domain of unknown function (DUF1870)This domain is found in a set of hypothetical bacterial proteins. It contains a helix-turn-helix domain so may be a DNA-binding protein. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
anti-CRISPR-associated protein Aca2 - -
DNA (27-MER)---
DNA (27-MER)---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR015060Aca2/YdiL-likeFamily
A, B
IPR027910YdiL domain superfamilyHomologous Superfamily
A, B
IPR010982Lambda repressor-like, DNA-binding domain superfamilyHomologous Superfamily