7Z17 | pdb_00007z17

E. coli C-P lyase bound to a PhnK ABC dimer in an open conformation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
FSCOP2B SuperfamilyPhnH-like 8034005 3001133 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPhnH-like 8034005 3001133 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Fe7z17F1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
Be7z17B1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
Ce7z17C1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
Ge7z17G1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
Ie7z17I1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
Je7z17J1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
He7z17H1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
De7z17D1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
Ee7z17E1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
Ae7z17A1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
F3.40.50.11310 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Bacterial phosphonate metabolism protein PhnHCATH (utative)
B3.40.50.11310 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Bacterial phosphonate metabolism protein PhnHCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B, F
PF05845Bacterial phosphonate metabolism protein (PhnH) (PhnH)Bacterial phosphonate metabolism protein (PhnH)- Family
C, G
PF05861Bacterial phosphonate metabolism protein (PhnI) (PhnI)Bacterial phosphonate metabolism protein (PhnI)- Family
I, J
PF08352Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)Oligopeptide/dipeptide transporter, C-terminal region- Family
I, J
PF00005ABC transporter (ABC_tran)ABC transporterABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are comp ...ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are composed of two copies of this domain and two copies of a transmembrane domain Pfam:PF00664. These four domains may belong to a single polypeptide as in Swiss:P13569, or belong in different polypeptide chains.
Domain
D, H
PF06007Phosphonate metabolism protein PhnJ (PhnJ)Phosphonate metabolism protein PhnJ- Family
A, E
PF06754Phosphonate metabolism protein PhnG (PhnG)Phosphonate metabolism protein PhnG- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B, F
Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH
C, G
Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI
I, J
Putative phosphonates utilization ATP-binding protein PhnK
D, H
Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase
A, E
Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG