8B2L

Cryo-EM structure of the plant 80S ribosome


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth A1]PF00900e8b2lA11 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00900ECOD (1.6)
A [auth A1]PF00467,PF16121e8b2lA12 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF16121ECOD (1.6)
A [auth A1]PF08071e8b2lA13 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF08071ECOD (1.6)
J [auth H1]PF01282e8b2lH11 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF01282ECOD (1.6)
K [auth I1]PF03297e8b2lI11 A: alpha arraysX: HTHH: HTHT: wingedF: PF03297ECOD (1.6)
L [auth J1]PF01283e8b2lJ11 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01283ECOD (1.6)
M [auth K1]PF01667e8b2lK11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01667ECOD (1.6)
N [auth L1]PF01200e8b2lL11 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01200ECOD (1.6)
O [auth M1]PF04758e8b2lM11 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: PF04758ECOD (1.6)
P [auth N1]PF01599e8b2lN11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01599ECOD (1.6)
Q [auth O1]PF01251e8b2lO12 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: PF01251ECOD (1.6)
R [auth P1]PF01201e8b2lP11 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF01201ECOD (1.6)
S [auth Q1]PF00400e8b2lQ11 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
B [auth k1]PF01092e8b2lk11 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01092ECOD (1.6)
T [auth R1]PF00338e8b2lR11 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
U [auth S1]PF00411e8b2lS11 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
V [auth T1]PF00164e8b2lT11 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
W [auth U1]PF00416e8b2lU11 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
X [auth V1]PF00253e8b2lV11 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
Y [auth W1]PF08069e8b2lW12 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: PF08069ECOD (1.6)
Y [auth W1]PF00312e8b2lW11 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
Z [auth X1]PF00366,PF16205e8b2lX11 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366,PF16205ECOD (1.6)
AA [auth Y1]PF00203e8b2lY11 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
BA [auth Z1]PF00318e8b2lZ11 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
CA [auth a1]PF00189e8b2la11 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
CA [auth a1]PF07650e8b2la12 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
DA [auth b1]PF00163,PF01479e8b2lb11 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
EA [auth c1]PF03719e8b2lc12 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
EA [auth c1]PF00333e8b2lc13 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
EA [auth c1]PF00333e8b2lc11 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF00333ECOD (1.6)
FA [auth d1]PF00177e8b2ld11 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
GA [auth e1]PF00410e8b2le11 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
GA [auth e1]PF00410e8b2le12 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
HA [auth f1]PF00380e8b2lf11 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
MA [auth D3]PF01294e8b2lD31 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: PF01294ECOD (1.6)
NA [auth E3]PF01929e8b2lE31 A: beta barrelsX: SH3H: SH3T: SH3F: PF01929ECOD (1.6)
D [auth l1]PF03501e8b2ll11 A: alpha arraysX: HTHH: HTHT: wingedF: PF03501ECOD (1.6)
OA [auth F3]PF00827e8b2lF31 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
QA [auth H3]PF01280e8b2lH31 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
QA [auth H3]PF01280e8b2lH32 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
RA [auth I3]F_UNCLASSIFIEDe8b2lI31 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
RA [auth I3]PF01775e8b2lI32 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
SA [auth J3]PF01157e8b2lJ31 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
TA [auth K3]PF01776e8b2lK31 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
UA [auth L3]PF01246e8b2lL31 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
VA [auth M3]PF00467,PF01777e8b2lM31 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01777ECOD (1.6)
WA [auth N3]PF01778e8b2lN31 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: PF01778ECOD (1.6)
XA [auth O3]PF01779e8b2lO31 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
E [auth C1]PF01248e8b2lC11 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
YA [auth P3]PF01248e8b2lP31 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
ZA [auth Q3]PF01198e8b2lQ31 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
AB [auth R3]PF01655e8b2lR31 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
BB [auth S3]PF01247e8b2lS31 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
CB [auth T3]PF01199e8b2lT31 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
EB [auth V3]PF01907e8b2lV31 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
FB [auth W3]PF01781e8b2lW31 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
GB [auth X3]PF00832e8b2lX31 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
HB [auth Y3]PF01020e8b2lY31 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01020ECOD (1.6)
F [auth D1]PF00833e8b2lD11 A: alpha arraysX: HTHH: HTHT: FF domainF: PF00833ECOD (1.6)
IB [auth p3]PF05162e8b2lp31 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: PF05162ECOD (1.6)
JB [auth Z3]PF00935e8b2lZ31 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
KB [auth a3]PF01780e8b2la31 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
LB [auth b3]PF01159,PF03868e8b2lb31 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159,PF03868ECOD (1.6)
MB [auth c3]PF01248e8b2lc31 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
NB [auth d3]PF00572e8b2ld31 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
OB [auth e3]PF00238e8b2le31 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
PB [auth f3]PF00828e8b2lf31 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
RB [auth h3]PF14204,PF17144e8b2lh31 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF14204,PF17144ECOD (1.6)
G [auth E1]PF01090e8b2lE11 A: alpha arraysX: HTHH: HTHT: wingedF: PF01090ECOD (1.6)
SB [auth j3]PF00237e8b2lj31 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
TB [auth k3]PF00276,PF03939e8b2lk31 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276,PF03939ECOD (1.6)
UB [auth m3]PF16906e8b2lm31 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
VB [auth n3]PF00831e8b2ln31 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
WB [auth o3]PF00181e8b2lo32 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
WB [auth o3]PF03947e8b2lo31 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
XB [auth q3]PF00327,PF08079e8b2lq31 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)
YB [auth r3]PF00297e8b2lr31 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
ZB [auth s3]PF00573,PF14374e8b2ls31 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573,PF14374ECOD (1.6)
ZB [auth s3]PF14374e8b2ls32 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: PF14374ECOD (1.6)
AC [auth t3]PF00281,PF00673e8b2lt31 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
BC [auth u3]PF00347e8b2lu31 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
H [auth F1]PF01015e8b2lF11 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: PF01015ECOD (1.6)
H [auth F1]PF01015e8b2lF12 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: PF01015ECOD (1.6)
I [auth G1]PF01249e8b2lG11 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: PF01249ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth A1]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
A [auth A1]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
A [auth A1]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
A [auth A1]PF00467KOW motif (KOW)KOW motif- Family
J [auth H1]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
K [auth I1]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
L [auth J1]PF01283Ribosomal protein S26e (Ribosomal_S26e)Ribosomal protein S26e- Family
M [auth K1]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
N [auth L1]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
O [auth M1]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
P [auth N1]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
Q [auth O1]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
R [auth P1]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
S [auth Q1]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
B [auth k1]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
T [auth R1]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
U [auth S1]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
V [auth T1]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
W [auth U1]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
X [auth V1]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
Y [auth W1]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].Domain
Y [auth W1]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
Z [auth X1]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
Z [auth X1]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
AA [auth Y1]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
BA [auth Z1]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
CA [auth a1]PF07650KH domain (KH_2)KH domain- Domain
CA [auth a1]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
DA [auth b1]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
DA [auth b1]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
EA [auth c1]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
EA [auth c1]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
FA [auth d1]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
GA [auth e1]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
HA [auth f1]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
MA [auth D3]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
NA [auth E3]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
D [auth l1]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
OA [auth F3]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
PA [auth G3]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
QA [auth H3]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
RA [auth I3]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
SA [auth J3]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
TA [auth K3]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
UA [auth L3]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
VA [auth M3]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
VA [auth M3]PF00467KOW motif (KOW)KOW motif- Family
WA [auth N3]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
XA [auth O3]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
E [auth C1]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
YA [auth P3]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
ZA [auth Q3]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
AB [auth R3]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
BB [auth S3]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
CB [auth T3]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
DB [auth U3]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
EB [auth V3]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
FB [auth W3]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
GB [auth X3]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
HB [auth Y3]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
F [auth D1]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
IB [auth p3]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
JB [auth Z3]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
KB [auth a3]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
LB [auth b3]PF03868Ribosomal protein L6, N-terminal domain (Ribosomal_L6e_N)Ribosomal protein L6, N-terminal domain- Domain
LB [auth b3]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
MB [auth c3]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
NB [auth d3]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
OB [auth e3]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
PB [auth f3]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
QB [auth g3]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
RB [auth h3]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
RB [auth h3]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
G [auth E1]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
SB [auth j3]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
TB [auth k3]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
TB [auth k3]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
UB [auth m3]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
UB [auth m3]PF00467KOW motif (KOW)KOW motif- Family
VB [auth n3]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
WB [auth o3]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
WB [auth o3]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
XB [auth q3]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
XB [auth q3]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
YB [auth r3]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
ZB [auth s3]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
ZB [auth s3]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
AC [auth t3]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
AC [auth t3]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
BC [auth u3]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
H [auth F1]PF01015Ribosomal S3Ae family (Ribosomal_S3Ae)Ribosomal S3Ae family- Family
I [auth G1]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth A1]40S ribosomal protein S4
J [auth H1]40S ribosomal protein S24
K [auth I1]40S ribosomal protein S25 -
L [auth J1]40S ribosomal protein S26
M [auth K1]40S ribosomal protein S27
N [auth L1]40S ribosomal protein S28
O [auth M1]40S ribosomal protein S30
P [auth N1]ubiquitin-40S ribosomal protein S27a-like
Q [auth O1]40S ribosomal protein S7
R [auth P1]40S ribosomal protein S8
S [auth Q1]guanine nucleotide-binding protein subunit beta-like protein
B [auth k1]40S ribosomal protein S6
T [auth R1]40S ribosomal protein S20-2
U [auth S1]40S ribosomal protein S14-2
V [auth T1]40S ribosomal protein S23
W [auth U1]40S ribosomal protein S18
X [auth V1]40S ribosomal protein S29
Y [auth W1]30S ribosomal protein S15, chloroplastic
Z [auth X1]40S ribosomal protein S11-like
AA [auth Y1]40S ribosomal protein S15-like
BA [auth Z1]40S ribosomal protein SA
CA [auth a1]40S ribosomal protein S3-2-like
C [auth h1]18S rRNA---
DA [auth b1]40S ribosomal protein S9-2-like
EA [auth c1]40S ribosomal protein S2-3-like
FA [auth d1]40S ribosomal protein S5-like
GA [auth e1]40S ribosomal protein S15a-1
HA [auth f1]40S ribosomal protein S16
IA [auth B1]mRNA---
JA [auth i2],
KA [auth W2]
tRNA---
LA [auth C3]5S rRNA---
MA [auth D3]60S ribosomal protein L13
NA [auth E3]60S ribosomal protein L14-1
D [auth l1]40S ribosomal protein S10-1-like -
OA [auth F3]Ribosomal protein L15
PA [auth G3]60S ribosomal protein L18-2-like
QA [auth H3]Ribosomal protein L19
RA [auth I3]60S ribosomal protein L18a
SA [auth J3]60S ribosomal protein L21-1-like
TA [auth K3]60S ribosomal protein L22-2-like
UA [auth L3]60S ribosomal protein L24-like
VA [auth M3]eL27 (60S ribosomal protein L27)
WA [auth N3]eL28 (60S ribosomal protein L28)
XA [auth O3]60S ribosomal protein L29
E [auth C1]40S ribosomal protein S12
YA [auth P3]60S ribosomal protein L30-like -
ZA [auth Q3]eL31 (60S ribosomal protein L31)
AB [auth R3]60S ribosomal protein L32-1
BB [auth S3]eL33 (60S ribosomal protein L35a)
CB [auth T3]60S ribosomal protein L34
DB [auth U3]eL36 (60S ribosomal protein L36)
EB [auth V3]Ribosomal protein L37
FB [auth W3]60S ribosomal protein L38
GB [auth X3]60S ribosomal protein L39-3
HB [auth Y3]ubiquitin-60S ribosomal protein L40
F [auth D1]40S ribosomal protein S17-like
IB [auth p3]60S ribosomal protein L41
JB [auth Z3]60S ribosomal protein L44
KB [auth a3]60S ribosomal protein L37a
LB [auth b3]eL6 (60S ribosomal protein L6)
MB [auth c3]60S ribosomal protein L7a
NB [auth d3]uL13 (60S ribosomal protein L13a)
OB [auth e3]60S ribosomal protein L23
PB [auth f3]uL15 (60S ribosomal protein L27a)
QB [auth g3]uL16 (60S ribosomal protein L10)
RB [auth h3]60S ribosomal protein L5-like
G [auth E1]40S ribosomal protein S19-3
SB [auth j3]50S ribosomal protein L22, chloroplastic
TB [auth k3]60S ribosomal protein L23a
UB [auth m3]uL24 (60S ribosomal protein L26)
VB [auth n3]60S ribosomal protein L35-like
WB [auth o3]uL2 (60S ribosomal protein L8)
XB [auth q3]60S ribosomal protein L7-4-like
YB [auth r3]uL3 (60S ribosomal protein L3)
ZB [auth s3]uL4 (60S ribosomal protein L4)
AC [auth t3]uL5 (60S ribosomal protein L11)
BC [auth u3]uL6 (60S ribosomal protein L9)
H [auth F1]40S ribosomal protein S3a
CC [auth l3]nascent chain---
DC [auth A3]25S rRNA---
EC [auth B3]5.8S rRNA---
I [auth G1]40S ribosomal protein S21

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth A1]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
A [auth A1]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
A [auth A1]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
A [auth A1]IPR002942RNA-binding S4 domainDomain
A [auth A1]IPR013845Small ribosomal subunit protein eS4, central regionDomain
A [auth A1]IPR000876Small ribosomal subunit protein eS4Family
A [auth A1]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
A [auth A1]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
A [auth A1]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
A [auth A1]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
A [auth A1]IPR005824KOWDomain
J [auth H1]IPR001976Small ribosomal subunit protein eS24Family
J [auth H1]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
J [auth H1]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
K [auth I1]IPR004977Small ribosomal subunit protein eS25Family
L [auth J1]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
L [auth J1]IPR000892Small ribosomal subunit protein eS26Family
L [auth J1]IPR047864Ribosomal protein eS26, conserved siteConserved Site
M [auth K1]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
M [auth K1]IPR000592Small ribosomal subunit protein eS27Family
M [auth K1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
N [auth L1]IPR028626Ribosomal protein eS28 conserved siteConserved Site
N [auth L1]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
N [auth L1]IPR000289Small ribosomal subunit protein eS28Family
O [auth M1]IPR006846Small ribosomal subunit protein eS30Family
P [auth N1]IPR019954Ubiquitin conserved siteConserved Site
P [auth N1]IPR000626Ubiquitin-like domainDomain
P [auth N1]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
P [auth N1]IPR002906Small ribosomal subunit protein eS31Domain
P [auth N1]IPR019956Ubiquitin domainDomain
P [auth N1]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
P [auth N1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Q [auth O1]IPR000554Small ribosomal subunit protein eS7Family
Q [auth O1]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
R [auth P1]IPR001047Small ribosomal subunit protein eS8Family
R [auth P1]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
R [auth P1]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
R [auth P1]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
S [auth Q1]IPR019775WD40 repeat, conserved siteConserved Site
S [auth Q1]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
S [auth Q1]IPR045223Small ribosomal subunit protein RACK1-likeFamily
S [auth Q1]IPR001680WD40 repeatRepeat
S [auth Q1]IPR020472G-protein beta WD-40 repeatRepeat
S [auth Q1]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
B [auth k1]IPR014401Small ribosomal subunit protein eS6-likeFamily
B [auth k1]IPR001377Small ribosomal subunit protein eS6Family
B [auth k1]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
T [auth R1]IPR001848Small ribosomal subunit protein uS10Family
T [auth R1]IPR027486Small ribosomal subunit protein uS10 domainDomain
T [auth R1]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
T [auth R1]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
T [auth R1]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
U [auth S1]IPR001971Small ribosomal subunit protein uS11Family
U [auth S1]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
U [auth S1]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
V [auth T1]IPR006032Small ribosomal subunit protein uS12Family
V [auth T1]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
V [auth T1]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
W [auth U1]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
W [auth U1]IPR001892Small ribosomal subunit protein uS13Family
W [auth U1]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
W [auth U1]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
X [auth V1]IPR001209Small ribosomal subunit protein uS14Family
X [auth V1]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
X [auth V1]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
Y [auth W1]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
Y [auth W1]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
Y [auth W1]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
Y [auth W1]IPR000589Small ribosomal subunit protein uS15Family
Z [auth X1]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
Z [auth X1]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Z [auth X1]IPR000266Small ribosomal subunit protein uS17Family
Z [auth X1]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
Z [auth X1]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
AA [auth Y1]IPR002222Small ribosomal subunit protein uS19Family
AA [auth Y1]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
AA [auth Y1]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
AA [auth Y1]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
BA [auth Z1]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
BA [auth Z1]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
BA [auth Z1]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
BA [auth Z1]IPR001865Small ribosomal subunit protein uS2Family
BA [auth Z1]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
CA [auth a1]IPR004044K Homology domain, type 2Domain
CA [auth a1]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
CA [auth a1]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
CA [auth a1]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
CA [auth a1]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
CA [auth a1]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
CA [auth a1]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
DA [auth b1]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
DA [auth b1]IPR002942RNA-binding S4 domainDomain
DA [auth b1]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
DA [auth b1]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
DA [auth b1]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
DA [auth b1]IPR022801Small ribosomal subunit protein uS4Family
EA [auth c1]IPR000851Small ribosomal subunit protein uS5Family
EA [auth c1]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
EA [auth c1]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
EA [auth c1]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
EA [auth c1]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
EA [auth c1]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
EA [auth c1]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
FA [auth d1]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
FA [auth d1]IPR000235Small ribosomal subunit protein uS7Family
FA [auth d1]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
FA [auth d1]IPR023798Small ribosomal subunit protein uS7 domainDomain
FA [auth d1]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
GA [auth e1]IPR000630Small ribosomal subunit protein uS8Family
GA [auth e1]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
GA [auth e1]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
HA [auth f1]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
HA [auth f1]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
HA [auth f1]IPR000754Small ribosomal subunit protein uS9Family
HA [auth f1]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
MA [auth D3]IPR001380Large ribosomal subunit protein eL13Family
MA [auth D3]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
NA [auth E3]IPR039660Large ribosomal subunit protein eL14Family
NA [auth E3]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
NA [auth E3]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
NA [auth E3]IPR002784Large ribosomal subunit protein eL14 domainDomain
NA [auth E3]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
D [auth l1]IPR037447Small ribosomal subunit protein eS10Family
D [auth l1]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
D [auth l1]IPR005326Plectin/eS10, N-terminalDomain
OA [auth F3]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
OA [auth F3]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
OA [auth F3]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
OA [auth F3]IPR000439Large ribosomal subunit protein eL15Family
PA [auth G3]IPR021131Large ribosomal subunit protein uL15/eL18Domain
PA [auth G3]IPR000039Large ribosomal subunit protein eL18Family
PA [auth G3]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
QA [auth H3]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
QA [auth H3]IPR039547Large ribosomal subunit protein eL19Family
QA [auth H3]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
QA [auth H3]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
QA [auth H3]IPR000196Large ribosomal subunit protein eL19 domainDomain
QA [auth H3]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
RA [auth I3]IPR028877Large ribosomal subunit protein eL20Family
RA [auth I3]IPR023573Large ribosomal subunit protein eL20 domainDomain
RA [auth I3]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
SA [auth J3]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
SA [auth J3]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
SA [auth J3]IPR001147Large ribosomal subunit protein eL21Family
SA [auth J3]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
TA [auth K3]IPR002671Large ribosomal subunit protein eL22Family
TA [auth K3]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
UA [auth L3]IPR011017TRASH domainDomain
UA [auth L3]IPR000988Large ribosomal subunit protein eL24-relatedFamily
UA [auth L3]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
UA [auth L3]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
VA [auth M3]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
VA [auth M3]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
VA [auth M3]IPR005824KOWDomain
VA [auth M3]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
VA [auth M3]IPR001141Large ribosomal subunit protein eL27Family
VA [auth M3]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
WA [auth N3]IPR029004Ribosomal eL28/Mak16Domain
WA [auth N3]IPR002672Large ribosomal subunit protein eL28Family
XA [auth O3]IPR002673Large ribosomal subunit protein eL29Family
E [auth C1]IPR000530Small ribosomal subunit protein eS12Family
E [auth C1]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
E [auth C1]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
E [auth C1]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
YA [auth P3]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
YA [auth P3]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
YA [auth P3]IPR039109Large ribosomal subunit protein eL30-likeFamily
YA [auth P3]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
ZA [auth Q3]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
ZA [auth Q3]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
ZA [auth Q3]IPR000054Large ribosomal subunit protein eL31Family
AB [auth R3]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
AB [auth R3]IPR001515Large ribosomal subunit protein eL32Family
AB [auth R3]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
BB [auth S3]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
BB [auth S3]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
BB [auth S3]IPR001780Large ribosomal subunit protein eL33Family
BB [auth S3]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
CB [auth T3]IPR008195Large ribosomal subunit protein eL34Family
CB [auth T3]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
DB [auth U3]IPR000509Large ribosomal subunit protein eL36Family
DB [auth U3]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
EB [auth V3]IPR001569Large ribosomal subunit protein eL37Family
EB [auth V3]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
EB [auth V3]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
EB [auth V3]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
FB [auth W3]IPR002675Large ribosomal subunit protein eL38Family
FB [auth W3]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
GB [auth X3]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
GB [auth X3]IPR000077Large ribosomal subunit protein eL39Family
GB [auth X3]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
HB [auth Y3]IPR019954Ubiquitin conserved siteConserved Site
HB [auth Y3]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
HB [auth Y3]IPR000626Ubiquitin-like domainDomain
HB [auth Y3]IPR019956Ubiquitin domainDomain
HB [auth Y3]IPR001975Large ribosomal subunit protein eL40 domainDomain
HB [auth Y3]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
HB [auth Y3]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
F [auth D1]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
F [auth D1]IPR001210Small ribosomal subunit protein eS17Family
F [auth D1]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
IB [auth p3]IPR007836Large ribosomal subunit protein eS32Family
JB [auth Z3]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
JB [auth Z3]IPR000552Large ribosomal subunit protein eL42Family
KB [auth a3]IPR002674Large ribosomal subunit protein eL43Family
KB [auth a3]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
KB [auth a3]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
LB [auth b3]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
LB [auth b3]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
LB [auth b3]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
LB [auth b3]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
LB [auth b3]IPR000915Large ribosomal subunit protein eL6Family
MB [auth c3]IPR001921Large ribosomal subunit protein eL8Family
MB [auth c3]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
MB [auth c3]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
MB [auth c3]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
MB [auth c3]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
NB [auth d3]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
NB [auth d3]IPR005822Large ribosomal subunit protein uL13Family
NB [auth d3]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
NB [auth d3]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
OB [auth e3]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
OB [auth e3]IPR000218Large ribosomal subunit protein uL14Family
OB [auth e3]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
PB [auth f3]IPR021131Large ribosomal subunit protein uL15/eL18Domain
PB [auth f3]IPR030878Large ribosomal subunit protein uL15Family
PB [auth f3]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
PB [auth f3]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
QB [auth g3]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
QB [auth g3]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
QB [auth g3]IPR016180Large ribosomal subunit protein uL16 domainDomain
QB [auth g3]IPR047873Large ribosomal subunit protein uL16Family
QB [auth g3]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
RB [auth h3]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
RB [auth h3]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
G [auth E1]IPR001266Small ribosomal subunit protein eS19Family
G [auth E1]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
G [auth E1]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
G [auth E1]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
SB [auth j3]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
SB [auth j3]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
SB [auth j3]IPR001063Large ribosomal subunit protein uL22Family
SB [auth j3]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
TB [auth k3]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
TB [auth k3]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
TB [auth k3]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
TB [auth k3]IPR019985Large ribosomal subunit protein uL23Family
TB [auth k3]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
TB [auth k3]IPR013025Large ribosomal subunit protein uL23-likeFamily
UB [auth m3]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
UB [auth m3]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
UB [auth m3]IPR005824KOWDomain
UB [auth m3]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
UB [auth m3]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
UB [auth m3]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
VB [auth n3]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
VB [auth n3]IPR001854Large ribosomal subunit protein uL29Family
VB [auth n3]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
WB [auth o3]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
WB [auth o3]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
WB [auth o3]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
WB [auth o3]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
WB [auth o3]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
WB [auth o3]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
WB [auth o3]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
WB [auth o3]IPR002171Large ribosomal subunit protein uL2Family
XB [auth q3]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
XB [auth q3]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
XB [auth q3]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
XB [auth q3]IPR039699Large ribosomal subunit protein uL30Family
XB [auth q3]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
XB [auth q3]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
XB [auth q3]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
YB [auth r3]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
YB [auth r3]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
YB [auth r3]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
YB [auth r3]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
YB [auth r3]IPR000597Large ribosomal subunit protein uL3Family
ZB [auth s3]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
ZB [auth s3]IPR002136Large ribosomal subunit protein uL4Family
ZB [auth s3]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
ZB [auth s3]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
ZB [auth s3]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
AC [auth t3]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
AC [auth t3]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
AC [auth t3]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
AC [auth t3]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
AC [auth t3]IPR002132Large ribosomal subunit protein uL5Family
BC [auth u3]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
BC [auth u3]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
BC [auth u3]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
BC [auth u3]IPR000702Large ribosomal subunit protein uL6-likeFamily
H [auth F1]IPR001593Small ribosomal subunit protein eS1Family
H [auth F1]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
H [auth F1]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
I [auth G1]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
I [auth G1]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
I [auth G1]IPR001931Small ribosomal subunit protein eS21Family