8DO0
Cryo-EM structure of the human Sec61 complex inhibited by mycolactone
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | Protein translocase subunit SecE-like | 8098782 | 3002174 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2B Superfamily | SecY-like | 8098818 | 3000333 | SCOP2B (2022-06-29) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B] | PF00584 | SecE/Sec61-gamma subunits of protein translocation complex (SecE) | SecE/Sec61-gamma subunits of protein translocation complex | - | Family |
B [auth C] | PF03911 | Sec61beta family (Sec61_beta) | Sec61beta family | - | Family |
C [auth A] | PF10559 | Plug domain of Sec61p (Plug_translocon) | Plug domain of Sec61p | The Sec61/SecY translocon mediates translocation of proteins across the membrane and integration of membrane proteins into the lipid bilayer. The structure of the translocon revealed a plug domain blocking the pore on the lumenal side.The plug is unl ... | Domain |
C [auth A] | PF00344 | SecY (SecY) | SecY | - | Family |
Gene Product Annotation Gene Product Annotation
InterPro Annotation InterPro: Classification of protein families
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B] | IPR008158 | Protein translocase SEC61 complex, gamma subunit | Family |
A [auth B] | IPR001901 | Protein translocase complex, SecE/Sec61-gamma subunit | Family |
A [auth B] | IPR023391 | Protein translocase SecE domain superfamily | Homologous Superfamily |
B [auth C] | IPR030671 | Protein transport Sec61-beta/Sbh | Family |
B [auth C] | IPR016482 | Protein transport protein SecG/Sec61-beta/Sbh | Family |
C [auth A] | IPR002208 | SecY/SEC61-alpha family | Family |
C [auth A] | IPR030659 | SecY conserved site | Conserved Site |
C [auth A] | IPR023201 | SecY domain superfamily | Homologous Superfamily |
C [auth A] | IPR019561 | Translocon Sec61/SecY, plug domain | Domain |
Disease Associations: Pharos Pharos: Illuminating the Druggable Genome
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | General secretory pathway (Sec) | Protein translocase |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Sec, Translocase, and Insertase Proteins | Sec61 translocase, partially-open apo state (class 1) |