Campylobacter jejuni ketol-acid reductoisomerase in complex with NADPH and Hoe704


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
L [auth A]V-sete8uppA1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
K [auth F]V-sete8uppF1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
J [auth C]V-sete8uppC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
I [auth L]V-sete8uppL1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
H [auth E]V-sete8uppE1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
G [auth J]V-sete8uppJ1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
F [auth G]V-sete8uppG1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
E [auth D]V-sete8uppD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
D [auth I]V-sete8uppI1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
C [auth K]V-sete8uppK1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
B [auth H]V-sete8uppH1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
A [auth B]V-sete8uppB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF07991Acetohydroxy acid isomeroreductase, NADPH-binding domain (KARI_N)Acetohydroxy acid isomeroreductase, NADPH-binding domain- Family
PF01450Ketol-acid reductoisomerase, C-terminal domain (KARI_C)Ketol-acid reductoisomerase, C-terminal domainKetol-acid reductoisomerase (KARI; EC:1.1.1.86), also known as acetohydroxy acid isomeroreductase (AHIR or AHAIR), catalyses the conversion of acetohydroxy acids into dihydroxy valerates in the second step of the biosynthetic pathway for the essent ...Ketol-acid reductoisomerase (KARI; EC:1.1.1.86), also known as acetohydroxy acid isomeroreductase (AHIR or AHAIR), catalyses the conversion of acetohydroxy acids into dihydroxy valerates in the second step of the biosynthetic pathway for the essential branched-chain amino acids valine, leucine, and isoleucine [1, 2, 3, 4, 5, 6]. KARI is present only in bacteria, fungi, and plants, but not in animals. KARIs are divided into two classes on the basis of sequence length and oligomerisation state. Class I KARIs are ~340 amino acid residues in length and include all fungal KARIs, whereas class II KARIs are ~490 residues long and include all plant KARIs. Bacterial KARIs can be either class I or class II. KARIs are composed of two types of domains, an N-terminal Rossmann fold domain and one or two C-terminal knotted domains. Two intertwinned knotted domains are required for function, and in the short-chain or class I KARIs, each polypeptide chain has one knotted domain. As a result, dimerization of two monomers forms two complete KARI active sites. In the long-chain or class II KARIs, a duplication of the knotted domain has occurred and, as a result, the protein does not require dimerisation to complete its active site [1, 2, 3, 4, 5, 6]. The alpha-helical KARI C-terminal knotted domain can be described as a six-helix core in which helices coil like cable threads around each other, thus forming a bundle [1, 2, 3, 4, 5].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Ketol-acid reductoisomerase

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR013023Ketol-acid reductoisomeraseFamily
IPR014359Ketol-acid reductoisomerase, prokaryoticFamily
IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
IPR000506Ketol-acid reductoisomerase, C-terminalDomain
IPR013116Ketol-acid reductoisomerase, N-terminalDomain
IPR0089276-phosphogluconate dehydrogenase-like, C-terminal domain superfamilyHomologous Superfamily