8WQL | pdb_00008wql

In situ PBS-PSII supercomplex from cyanobacterial Spirulina platensis


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
R [auth BD]PD40e8wqlBD02 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
U [auth ED]PD40e8wqlED01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
T [auth DD]PD40e8wqlDD01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
Q [auth AD]PD40e8wqlAD01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
J [auth UB]PD40e8wqlUB01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
E [auth PB]PD40e8wqlPB01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
JF [auth c2]PD40e8wqlc201 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
IF [auth b2]PD40e8wqlb201 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
JC [auth VG]PD40e8wqlVG01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
D [auth OB]PD40e8wqlOB01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
EC [auth QG]PD40e8wqlQG01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
LA [auth ZD]PD40e8wqlZD01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
KA [auth YD]PD40e8wqlYD01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
JA [auth XD]PD40e8wqlXD01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
IA [auth VD]PD40e8wqlVD01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
HA [auth UD]PD40e8wqlUD01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
GA [auth TD]PD40e8wqlTD01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
DA [auth QD]PD40e8wqlQD01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
CA [auth OD]PD40e8wqlOD01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
BA [auth MD]PD40e8wqlMD01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
AA [auth LD]PD40e8wqlLD01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
Z [auth KD]PD40e8wqlKD01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
Y [auth JD]PD40e8wqlJD01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
X [auth ID]PD40e8wqlID01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
W [auth HD]PD40e8wqlHD01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
V [auth FD]PD40e8wqlFD01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)
A [auth BA]PD40e8wqlBA01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: PD40ECOD (develop294)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Photosystem II CP47 reaction center protein---
Cytochrome b559 subunit alpha---
Photosystem II D2 protein---
Photosystem II CP43 reaction center protein---
Photosystem II protein D1---
Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core---
Allophycocyanin beta chain---
Phycocyanin beta subunit-
C-phycocyanin alpha subunit---
JC [auth VG],
MN [auth mF],
PD [auth VL],
TP [auth mK]
Allophycocyanin-B alpha subunit---
Allophycocyanin alpha chain---
EC [auth QG],
GN [auth gF],
KD [auth QL],
NP [auth gK]
Allophycocyanin beta-18 subunit---
IB [auth EF],
OC [auth EK],
TB [auth BG],
ZC [auth BL]
LPP2---
Photosystem II reaction center protein Z---
Photosystem II reaction center protein Psb30---
Photosystem II reaction center protein X---
Photosystem II extrinsic protein V---
PsbU---
Photosystem II reaction center protein T---
BB [auth SE],
BF [auth S1],
FA [auth SD]
LPP1---
Photosystem II reaction center protein Y---
B [auth BB],
C [auth CB],
EH [auth B4],
FH [auth C4]
LCM---
PsbQ protein---
Photosystem II extrinsic protein O---
Photosystem II reaction center protein M---
Photosystem II reaction center protein L---
Photosystem II reaction center protein K---
Photosystem II reaction center protein J---
Photosystem II reaction center protein I---
Photosystem II reaction center protein H---
Cytochrome b559 subunit beta---
LRC1---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR038719Phycobilisome, alpha/beta subunit superfamilyHomologous Superfamily
IPR006247Phycocyanin, beta subunitFamily
IPR009050Globin-like superfamilyHomologous Superfamily
IPR012128Phycobilisome, alpha/beta subunitFamily