9B7R | pdb_00009b7r

Fab3-1 in complex with the capsid of Adeno-associated virus type 9


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
H [auth L]ecTbetaR2e9b7rL01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: ecTbetaR2ECOD (v295)
G [auth H]ecTbetaR2e9b7rH01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: ecTbetaR2ECOD (v295)
FReovirus_L2_GTasee9b7rF1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Reovirus_L2_GTaseECOD (v295)
EReovirus_L2_GTasee9b7rE1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Reovirus_L2_GTaseECOD (v295)
DReovirus_L2_GTasee9b7rD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Reovirus_L2_GTaseECOD (v295)
CReovirus_L2_GTasee9b7rC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Reovirus_L2_GTaseECOD (v295)
BReovirus_L2_GTasee9b7rB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Reovirus_L2_GTaseECOD (v295)
AReovirus_L2_GTasee9b7rA1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Reovirus_L2_GTaseECOD (v295)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
H [auth L]Light ChainIGKV3 Kappacapsid protein vp1 | capsid protein vp1 | capsid protein vp1 | capsid protein vp1 | capsid protein vp1SAbDab (2026-06-26)
G [auth H]Heavy ChainIGHV3 -capsid protein vp1 | capsid protein vp1 | capsid protein vp1 | capsid protein vp1 | capsid protein vp1SAbDab (2026-06-26)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
H [auth L]Fab3-1 light chain---
G [auth H]Fab3-1 heavy chain---
A, B, C, D, E
Capsid protein VP1 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR013607Phospholipase A2-like domainDomain
A, B, C, D, E
IPR016184Capsid/spike protein, ssDNA virusHomologous Superfamily
A, B, C, D, E
IPR001403Coat protein VP1/VP2, ParvovirusDomain
A, B, C, D, E
IPR036952Parvovirus coat protein VP1/VP2Homologous Superfamily