9DBY

ncPRC1RYBP bound to singly modified H2AK119Ub nucleosome


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, E
Histone H3.2 -
B, F
Histone H4
Histone H2A type 1 -
D, H
Histone H2B 1.1 -
Histone H2A type 1 -
DNA (187-MER)---
DNA (187-MER)---
Polycomb complex protein BMI-1
E3 ubiquitin-protein ligase RING2
RING1 and YY1-binding protein
Ubiquitin

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, E
IPR009072Histone-foldHomologous Superfamily
A, E
IPR007125Histone H2A/H2B/H3Domain
A, E
IPR000164Histone H3/CENP-AFamily
B, F
IPR009072Histone-foldHomologous Superfamily
B, F
IPR001951Histone H4Family
B, F
IPR035425CENP-T/Histone H4, histone foldDomain
B, F
IPR019809Histone H4, conserved siteConserved Site
B, F
IPR004823TATA box binding protein associated factor (TAF), histone-like fold domainDomain
IPR009072Histone-foldHomologous Superfamily
IPR007125Histone H2A/H2B/H3Domain
IPR002119Histone H2AFamily
IPR032454Histone H2A, C-terminal domainDomain
IPR032458Histone H2A conserved siteConserved Site
D, H
IPR009072Histone-foldHomologous Superfamily
D, H
IPR007125Histone H2A/H2B/H3Domain
D, H
IPR000558Histone H2BFamily
IPR009072Histone-foldHomologous Superfamily
IPR007125Histone H2A/H2B/H3Domain
IPR002119Histone H2AFamily
IPR032454Histone H2A, C-terminal domainDomain
IPR032458Histone H2A conserved siteConserved Site
IPR017907Zinc finger, RING-type, conserved siteConserved Site
IPR032443RAWUL domainDomain
IPR013083Zinc finger, RING/FYVE/PHD-typeHomologous Superfamily
IPR001841Zinc finger, RING-typeDomain
IPR043540E3 ubiquitin-protein ligase RING1/RING2Family
IPR017907Zinc finger, RING-type, conserved siteConserved Site
IPR032443RAWUL domainDomain
IPR037937E3 ubiquitin-protein ligase RING2, RAWUL domainDomain
IPR013083Zinc finger, RING/FYVE/PHD-typeHomologous Superfamily
IPR001841Zinc finger, RING-typeDomain
IPR036443Zinc finger, RanBP2-type superfamilyHomologous Superfamily
IPR039958RING1 and YY1-binding protein/YY1-associated factor 2Family
IPR033774Yaf2/RYBP C-terminal binding motifConserved Site
IPR001876Zinc finger, RanBP2-typeDomain
IPR019954Ubiquitin conserved siteConserved Site
IPR050158Ubiquitin and ubiquitin-likeFamily
IPR000626Ubiquitin-like domainDomain
IPR019956Ubiquitin domainDomain
IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily