9FK5 | pdb_00009fk5

Zebrafish Betaglycan Orphan Domain (zfBGo) in complex with TGF-B3 and extracellular domains of TGFBRI and TGFBRII


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyCystine-knot cytokines 8038775 3000846 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCystine-knot cytokines 8038775 3000846 SCOP2B (2022-06-29)
DSCOP2B SuperfamilySnake toxin-like 8038457 3000545 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00019Transforming growth factor beta like domain (TGF_beta)Transforming growth factor beta like domainDomain
PF00019Transforming growth factor beta like domain (TGF_beta)Transforming growth factor beta like domainDomain
PF01064Activin types I and II receptor domain (Activin_recp)Activin types I and II receptor domainThis Pfam entry consists of both TGF-beta receptor types. This is an alignment of the hydrophilic cysteine-rich ligand-binding domains, Both receptor types, (type I and II) posses a 9 amino acid cysteine box, with the the consensus CCX{4-5}CN. The t ...This Pfam entry consists of both TGF-beta receptor types. This is an alignment of the hydrophilic cysteine-rich ligand-binding domains, Both receptor types, (type I and II) posses a 9 amino acid cysteine box, with the the consensus CCX{4-5}CN. The type I receptors also possess 7 extracellular residues preceding the cysteine box.
Domain
PF08917Transforming growth factor beta receptor 2 ectodomain (ecTbetaR2)Transforming growth factor beta receptor 2 ectodomainThe Transforming growth factor beta receptor 2 ectodomain is a compact fold consisting of nine beta-strands and a single helix stabilised by a network of six intra strand disulphide bonds. The folding topology includes a central five-stranded antipar ...The Transforming growth factor beta receptor 2 ectodomain is a compact fold consisting of nine beta-strands and a single helix stabilised by a network of six intra strand disulphide bonds. The folding topology includes a central five-stranded antiparallel beta-sheet, eight-residues long at its centre, covered by a second layer consisting of two segments of two-stranded antiparallel beta-sheets (beta1-beta4, beta3-beta9) [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Transforming growth factor beta-3
Transforming growth factor beta-3
TGF-beta receptor type-1
TGF-beta receptor type-2
Transforming growth factor beta receptor III

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR029034Cystine-knot cytokineHomologous Superfamily
IPR017948Transforming growth factor beta, conserved siteConserved Site
IPR001839Transforming growth factor-beta, C-terminalDomain
IPR016319Transforming growth factor-betaFamily
IPR015618Transforming growth factor beta-3Family
IPR015615Transforming growth factor-beta-relatedFamily
IPR001111TGF-beta, propeptideDomain
IPR029034Cystine-knot cytokineHomologous Superfamily
IPR017948Transforming growth factor beta, conserved siteConserved Site
IPR001839Transforming growth factor-beta, C-terminalDomain
IPR016319Transforming growth factor-betaFamily
IPR015618Transforming growth factor beta-3Family
IPR015615Transforming growth factor-beta-relatedFamily
IPR001111TGF-beta, propeptideDomain
IPR000472Activin types I and II receptor domainDomain
IPR000719Protein kinase domainDomain
IPR003605GS domainDomain
IPR017441Protein kinase, ATP binding siteBinding Site
IPR008271Serine/threonine-protein kinase, active siteActive Site
IPR000333Ser/Thr protein kinase, TGFB receptorFamily
IPR045860Snake toxin-like superfamilyHomologous Superfamily
IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
IPR000719Protein kinase domainDomain
IPR017441Protein kinase, ATP binding siteBinding Site
IPR015013Transforming growth factor beta receptor 2 ectodomainDomain
IPR001245Serine-threonine/tyrosine-protein kinase, catalytic domainDomain
IPR008271Serine/threonine-protein kinase, active siteActive Site
IPR000333Ser/Thr protein kinase, TGFB receptorFamily
IPR017194Transforming growth factor-beta receptor, type IIFamily
IPR045860Snake toxin-like superfamilyHomologous Superfamily
IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
IPR017977Zona pellucida domain, conserved siteConserved Site
IPR042235Zona pellucida, ZP-C domainHomologous Superfamily
IPR001507Zona pellucida domainDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP10600
PharosP10600
PharosP36897
PharosP37173