9YO7 | pdb_00009yo7

Crystal structure of integrin a4b1 headpiece in complex with DS 13g (Mg)

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Integrin alpha-4,Integrin alpha-V	protein antigen binding protein binding binding antigen binding molecular transducer activity signaling receptor activity coreceptor activity cell adhesion molecule binding protein-containing complex binding integrin binding signaling receptor binding fibronectin binding extracellular matrix protein binding opsonin binding protein antigen binding protein binding binding antigen binding molecular transducer activity signaling receptor activity coreceptor activity cell adhesion molecule binding protein-containing complex binding integrin binding signaling receptor binding fibronectin binding extracellular matrix protein binding opsonin binding extracellular matrix binding enzyme binding protease binding transforming growth factor beta binding growth factor binding cytokine binding kinase binding protein kinase C binding protein kinase binding	cell adhesion cell-cell adhesion cell-cell adhesion mediated by integrin cell adhesion mediated by integrin cellular process leukocyte tethering or rolling leukocyte cell-cell adhesion leukocyte migration immune system process leukocyte adhesion to vascular endothelial cell cellular extravasation cell migration cell motility cell-matrix adhesion cell adhesion cell-cell adhesion cell-cell adhesion mediated by integrin cell adhesion mediated by integrin cellular process leukocyte tethering or rolling leukocyte cell-cell adhesion leukocyte migration immune system process leukocyte adhesion to vascular endothelial cell cellular extravasation cell migration cell motility cell-matrix adhesion cell-substrate adhesion ameboidal-type cell migration cell-matrix adhesion involved in ameboidal cell migration developmental process multicellular organismal process cellular developmental process hemopoiesis B cell activation cell activation cell development mononuclear cell differentiation lymphocyte differentiation lymphocyte activation leukocyte activation B cell differentiation cell differentiation anatomical structure development leukocyte differentiation regulation of tube diameter regulation of biological process system process regulation of tube size regulation of system process negative regulation of biological process biological regulation negative regulation of vasoconstriction circulatory system process regulation of blood circulation vascular process in circulatory system regulation of vasoconstriction regulation of multicellular organismal process blood vessel diameter maintenance regulation of biological quality negative regulation of multicellular organismal process vasoconstriction blood circulation regulation of anatomical structure size diapedesis formation of primary germ layer embryonic morphogenesis tissue development embryo development gastrulation anatomical structure morphogenesis multicellular organism development endoderm development anatomical structure formation involved in morphogenesis endoderm formation animal gross anatomical part developmental process endodermal cell differentiation substrate adhesion-dependent cell spreading cellular response to stimulus integrin-mediated signaling pathway regulation of cellular process cell surface receptor signaling pathway response to stimulus signaling cell communication signal transduction developmental growth cell projection organization plasma membrane bounded cell projection morphogenesis neuron projection development cell growth cell morphogenesis cellular component organization neurogenesis cell projection morphogenesis neuron differentiation neuron projection morphogenesis cellular component organization or biogenesis system development neuron projection extension plasma membrane bounded cell projection organization developmental cell growth growth nervous system development developmental growth involved in morphogenesis generation of neurons neuron development immune response in gut-associated lymphoid tissue immune response cell population proliferation positive regulation of cell population proliferation endothelial cell proliferation positive regulation of epithelial cell proliferation positive regulation of biological process regulation of vascular endothelial cell proliferation regulation of endothelial cell proliferation regulation of cell population proliferation positive regulation of endothelial cell proliferation regulation of epithelial cell proliferation vascular endothelial cell proliferation epithelial cell proliferation positive regulation of vascular endothelial cell proliferation positive regulation of cellular process regulation of cell motility positive regulation of leukocyte cell-cell adhesion regulation of leukocyte adhesion to vascular endothelial cell positive regulation of cell-cell adhesion positive regulation of leukocyte tethering or rolling regulation of cell migration regulation of cell-cell adhesion regulation of immune system process locomotion positive regulation of cell adhesion regulation of cell adhesion regulation of leukocyte migration positive regulation of leukocyte adhesion to vascular endothelial cell regulation of leukocyte tethering or rolling regulation of locomotion regulation of leukocyte cell-cell adhesion regulation of cellular extravasation positive regulation of locomotion regulation of lymphocyte migration positive regulation of cell migration positive regulation of cell motility positive regulation of mononuclear cell migration regulation of mononuclear cell migration positive regulation of immune system process positive regulation of lymphocyte migration positive regulation of T cell migration lymphocyte migration positive regulation of leukocyte migration regulation of T cell migration mononuclear cell migration T cell migration positive regulation of endothelial cell apoptotic process positive regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death cell death positive regulation of apoptotic process endothelial cell apoptotic process apoptotic process programmed cell death regulation of endothelial cell apoptotic process heterotypic cell-cell adhesion axonogenesis innervation nerve development axon development cell morphogenesis involved in neuron differentiation axonogenesis involved in innervation localization cellular localization receptor clustering macromolecule localization intracellular protein localization localization within membrane protein localization to membrane vesicle localization establishment of organelle localization import into cell transport establishment of vesicle localization clathrin-dependent extracellular exosome endocytosis establishment of localization vesicle-mediated transport organelle localization establishment of localization in cell clathrin-dependent endocytosis receptor-mediated endocytosis endocytosis cellular response to nitrogen compound response to oxygen-containing compound response to nitrogen compound cellular response to amyloid-beta cellular response to oxygen-containing compound cellular response to chemical stimulus response to chemical response to amyloid-beta response to peptide response to cytokine cellular response to cytokine stimulus biological process involved in interspecies interaction between organisms symbiont entry into host cell viral process symbiont entry into host viral life cycle entry into host cell by a symbiont-containing vacuole biological process involved in interaction with host biological process involved in symbiotic interaction regulation of localization negative regulation of lipid transport regulation of transport lipid localization lipid transport negative regulation of transport regulation of lipid transport negative regulation of lipid localization regulation of lipid localization biosynthetic process cytokine production metabolic process macromolecule metabolic process gene expression macromolecule biosynthetic process transforming growth factor beta production lipid storage regulation of lipid storage negative regulation of lipid storage negative regulation of cellular process nutrient storage monoatomic ion transmembrane transport calcium ion transport metal ion transport monoatomic cation transmembrane transport transmembrane transport monoatomic ion transport monoatomic cation transport calcium ion transmembrane transport signal transduction in absence of ligand extrinsic apoptotic signaling pathway apoptotic signaling pathway extrinsic apoptotic signaling pathway in absence of ligand positive regulation of osteoblast proliferation osteoblast proliferation regulation of osteoblast proliferation regulation of plasma lipoprotein particle levels regulation of low-density lipoprotein particle clearance negative regulation of low-density lipoprotein particle clearance plasma lipoprotein particle clearance negative regulation of lipoprotein particle clearance regulation of lipoprotein particle clearance low-density lipoprotein particle clearance regulation of cellular component organization regulation of phagocytosis phagocytosis regulation of endocytosis positive regulation of cell communication regulation of signaling positive regulation of signal transduction positive regulation of intracellular signal transduction regulation of signal transduction intracellular signal transduction positive regulation of response to stimulus regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication positive regulation of signaling wound healing epithelium development morphogenesis of an epithelium epiboly involved in wound healing morphogenesis of an epithelial sheet wound healing, spreading of epidermal cells tissue morphogenesis response to stress epiboly wound healing, spreading of cells response to wounding chemotaxis negative chemotaxis taxis response to external stimulus negative regulation of signaling negative regulation of cell communication negative regulation of extrinsic apoptotic signaling pathway negative regulation of apoptotic signaling pathway negative regulation of response to stimulus negative regulation of programmed cell death negative regulation of signal transduction regulation of extrinsic apoptotic signaling pathway negative regulation of apoptotic process regulation of apoptotic signaling pathway negative regulation of lipoprotein metabolic process regulation of protein metabolic process lipoprotein metabolic process negative regulation of metabolic process primary metabolic process regulation of macromolecule metabolic process regulation of primary metabolic process regulation of lipoprotein metabolic process protein metabolic process regulation of metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process apoptotic cell clearance modulation by symbiont of entry into host negative regulation of entry of bacterium into host cell entry of bacterium into host cell regulation of entry of bacterium into host cell regulation of biological process involved in symbiotic interaction regulation of developmental process negative regulation of developmental process macrophage derived foam cell differentiation regulation of cell differentiation negative regulation of macrophage derived foam cell differentiation foam cell differentiation regulation of macrophage derived foam cell differentiation negative regulation of cell differentiation positive regulation of cytosolic calcium ion concentration blood vessel morphogenesis tube development angiogenesis vasculature development circulatory system development tube morphogenesis blood vessel development apolipoprotein A-I-mediated signaling pathway intracellular signaling cassette MAPK cascade ERK1 and ERK2 cascade vasculogenesis small GTPase-mediated signal transduction regulation of small GTPase mediated signal transduction positive regulation of small GTPase mediated signal transduction	cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction integrin alpha4-beta1 complex protein-containing complex plasma membrane protein complex membrane plasma membrane membrane protein complex cell periphery integrin complex plasma membrane signaling receptor complex cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction integrin alpha4-beta1 complex protein-containing complex plasma membrane protein complex membrane plasma membrane membrane protein complex cell periphery integrin complex plasma membrane signaling receptor complex signaling receptor complex protein complex involved in cell adhesion extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle cell surface integrin alpha4-beta7 complex growth cone axon cell projection distal axon neuron projection plasma membrane bounded cell projection site of polarized growth somatodendritic compartment cell body neuronal cell body intracellular anatomical structure intracellular vesicle intracellular membrane-bounded organelle endomembrane system specific granule membrane intracellular organelle cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane cytoplasmic vesicle secretory granule secretory vesicle cytoplasm organelle membrane secretory granule membrane specific granule alphav-beta3 integrin-PKCalpha complex external side of plasma membrane side of membrane integrin alphav-beta5 complex integrin alphav-beta8 complex intracellular membraneless organelle actin cytoskeleton actin-based cell projection cytoskeleton membraneless organelle plasma membrane region microvillus microvillus membrane cell projection membrane alphav-beta3 integrin-HMGB1 complex alphav-beta3 integrin-IGF-1-IGF1R complex integrin alphav-beta3 complex ruffle cell leading edge leading edge membrane ruffle membrane phagocytic vesicle endocytic vesicle integrin alphav-beta1 complex lamellipodium membrane lamellipodium integrin alphav-beta6 complex filopodium membrane filopodium
B	Integrin beta	molecular transducer activity coreceptor activity signaling receptor activity cell adhesion molecule binding protein binding binding enzyme binding protease binding protein-containing complex binding fibronectin binding	cell adhesion cell-matrix adhesion cell-substrate adhesion cellular process developmental process multicellular organismal process blood vessel morphogenesis tube development angiogenesis vasculature development circulatory system development anatomical structure morphogenesis multicellular organism development tube morphogenesis cell adhesion cell-matrix adhesion cell-substrate adhesion cellular process developmental process multicellular organismal process blood vessel morphogenesis tube development angiogenesis vasculature development circulatory system development anatomical structure morphogenesis multicellular organism development tube morphogenesis anatomical structure formation involved in morphogenesis anatomical structure development animal gross anatomical part developmental process blood vessel development system development cellular response to stimulus regulation of biological process integrin-mediated signaling pathway regulation of cellular process cell surface receptor signaling pathway response to stimulus signaling biological regulation cell communication signal transduction positive regulation of cell communication cellular response to growth factor stimulus positive regulation of signal transduction positive regulation of biological process regulation of signal transduction cell surface receptor protein tyrosine kinase signaling pathway positive regulation of response to stimulus cellular response to endogenous stimulus regulation of vascular endothelial growth factor signaling pathway enzyme-linked receptor protein signaling pathway positive regulation of cellular process regulation of signaling regulation of cellular response to vascular endothelial growth factor stimulus response to endogenous stimulus regulation of cellular response to growth factor stimulus positive regulation of vascular endothelial growth factor signaling pathway vascular endothelial growth factor signaling pathway regulation of response to stimulus regulation of cell communication cellular response to vascular endothelial growth factor stimulus response to growth factor positive regulation of signaling cell adhesion mediated by integrin formation of primary germ layer mesodermal cell differentiation cellular developmental process mesoderm morphogenesis embryonic morphogenesis tissue development embryo development gastrulation tissue morphogenesis cell differentiation mesoderm formation mesoderm development heterotypic cell-cell adhesion cell-cell adhesion regulation of developmental process	cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction cell projection cell leading edge plasma membrane bounded cell projection lamellipodium membrane-bounded organelle intracellular anatomical structure pigment granule intracellular vesicle intracellular membrane-bounded organelle cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction cell projection cell leading edge plasma membrane bounded cell projection lamellipodium membrane-bounded organelle intracellular anatomical structure pigment granule intracellular vesicle intracellular membrane-bounded organelle intracellular organelle melanosome cytoplasmic vesicle organelle cytoplasm vesicle ruffle plasma membrane membrane leading edge membrane cell periphery ruffle membrane plasma membrane region cell projection membrane cell surface endosome recycling endosome endomembrane system synapse protein-containing complex plasma membrane protein complex membrane protein complex integrin alpha9-beta1 complex integrin complex plasma membrane signaling receptor complex signaling receptor complex protein complex involved in cell adhesion intracellular membraneless organelle actin cytoskeleton actin-based cell projection cytoskeleton membraneless organelle filopodium

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR013517	FG-GAP repeat	Repeat
A	IPR013519	Integrin alpha beta-propellor	Repeat
A	IPR000413	Integrin alpha chain	Family
A	IPR048286	Integrin alpha, third immunoglobulin-like domain	Domain
A	IPR013649	Integrin alpha, first immunoglubulin-like domain	Domain
A	IPR028994	Integrin alpha, N-terminal	Homologous Superfamily
A	IPR048285	Integrin alpha, second immunoglobulin-like domain	Domain
A	IPR032695	Integrin domain superfamily	Homologous Superfamily
A	IPR018184	Integrin alpha chain, C-terminal cytoplasmic region, conserved site	Conserved Site
A	IPR013517	FG-GAP repeat	Repeat
A	IPR048286	Integrin alpha, third immunoglobulin-like domain	Domain
A	IPR013649	Integrin alpha, first immunoglubulin-like domain	Domain
A	IPR048285	Integrin alpha, second immunoglobulin-like domain	Domain
A	IPR032695	Integrin domain superfamily	Homologous Superfamily
A	IPR013519	Integrin alpha beta-propellor	Repeat
A	IPR000413	Integrin alpha chain	Family
A	IPR028994	Integrin alpha, N-terminal	Homologous Superfamily
A	IPR018184	Integrin alpha chain, C-terminal cytoplasmic region, conserved site	Conserved Site
B	IPR033760	Integrin beta N-terminal	Domain
B	IPR015812	Integrin beta subunit	Family
B	IPR036349	Integrin beta tail domain superfamily	Homologous Superfamily
B	IPR057243	Integrins beta, I-EGF domain, conserved site	Conserved Site
B	IPR002369	Integrin beta subunit, VWA domain	Domain
B	IPR014836	Integrin beta subunit, cytoplasmic domain	Domain
B	IPR016201	PSI domain	Domain
B	IPR040622	Integrin beta, epidermal growth factor-like domain 1	Domain
B	IPR012896	Integrin beta subunit, tail	Domain
B	IPR036465	von Willebrand factor A-like domain superfamily	Homologous Superfamily
B	IPR013111	Epidermal growth factor-like domain, extracellular	Domain
B	IPR057073	Integrin beta, epidermal growth factor-like domain 2	Domain
B	IPR032695	Integrin domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	: P06756	B-cell chronic lymphocytic leukemia inflammatory bowel disease ulcerative colitis Gliosis medulloblastoma pituitary cancer cutaneous lupus erythematosus intellectual disability large cell medulloblastoma malignant glioma multiple sclerosis Sjogren syndrome atypical teratoid rhabdoid tumor cystic fibrosis IgA glomerulonephritis B-cell chronic lymphocytic leukemia inflammatory bowel disease ulcerative colitis Gliosis medulloblastoma pituitary cancer cutaneous lupus erythematosus intellectual disability large cell medulloblastoma malignant glioma multiple sclerosis Sjogren syndrome atypical teratoid rhabdoid tumor cystic fibrosis IgA glomerulonephritis interstitial cystitis lung cancer malignant mesothelioma pilocytic astrocytoma tuberculosis autism Crohn disease glioblastoma invasive ductal breast carcinoma lung carcinoma Acute Cerebrovascular Accidents glioblastoma intracerebral hemorrhage myopathy osteosarcoma rheumatoid arthritis breast cancer cerebrovascular disorder hereditary spastic paraplegia large cell medulloblastoma nasopharyngeal carcinoma ovarian cancer tuberculosis diabetes mellitus inflammatory bowel disease medulloblastoma non-small cell lung carcinoma pilocytic astrocytoma