AF_AFO15055F1

Computed structure model of Period circadian protein homolog 2

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Period circadian protein homolog 2	transcription factor binding transcription coregulator binding transcription corepressor binding protein binding binding DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding transcription coactivator activity transcription regulator activity transcription factor binding transcription coregulator binding transcription corepressor binding protein binding binding DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding transcription coactivator activity transcription regulator activity transcription coregulator activity	regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process negative regulation of DNA-templated transcription regulation of biological process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process negative regulation of RNA metabolic process developmental process multicellular organismal process regulation of multicellular organismal development regulation of developmental process cellular developmental process cell development regulation of neurogenesis regulation of cell differentiation nervous system development regulation of cell development regulation of nervous system development multicellular organism development neurogenesis cell differentiation anatomical structure development regulation of multicellular organismal process animal gross anatomical part developmental process system development rhythmic process circadian rhythm regulation of circadian rhythm negative regulation of post-translational protein modification regulation of protein modification process regulation of protein ubiquitination protein ubiquitination negative regulation of protein modification process protein metabolic process negative regulation of protein ubiquitination regulation of protein modification by small protein conjugation or removal protein modification process negative regulation of protein metabolic process negative regulation of protein modification by small protein conjugation or removal regulation of post-translational protein modification regulation of protein metabolic process macromolecule modification post-translational protein modification protein modification by small protein conjugation protein modification by small protein conjugation or removal response to stimulus response to stress response to ischemia lactate biosynthetic process monocarboxylic acid biosynthetic process small molecule biosynthetic process oxoacid metabolic process carboxylic acid metabolic process carboxylic acid biosynthetic process lactate metabolic process small molecule metabolic process monocarboxylic acid metabolic process regulation of tube diameter system process regulation of tube size regulation of system process circulatory system process regulation of blood circulation regulation of vasoconstriction vascular process in circulatory system blood vessel diameter maintenance regulation of biological quality blood circulation vasoconstriction regulation of anatomical structure size negative regulation of circadian rhythm circadian regulation of gene expression fatty acid metabolic process lipid metabolic process negative regulation of cell population proliferation cell population proliferation fat cell proliferation regulation of cell population proliferation regulation of fat cell proliferation negative regulation of fat cell proliferation homeostatic process positive regulation of biological process adaptive thermogenesis multicellular organismal-level homeostasis regulation of cold-induced thermogenesis cold-induced thermogenesis temperature homeostasis positive regulation of cold-induced thermogenesis positive regulation of multicellular organismal process regulation of localization establishment of protein localization nitrogen compound transport regulation of hormone secretion regulation of protein localization regulation of peptide secretion transport signaling hormone secretion protein localization to extracellular region cell communication localization peptide secretion regulation of secretion by cell secretion by cell signal release intracellular protein localization regulation of peptide hormone secretion regulation of signaling regulation of transport secretion regulation of hormone levels regulation of peptide transport regulation of establishment of protein localization establishment of protein localization to extracellular region export from cell cell-cell signaling regulation of protein transport protein secretion establishment of localization regulation of protein secretion regulation of secretion peptide transport protein transport regulation of insulin secretion peptide hormone secretion macromolecule localization hormone transport regulation of cell communication insulin secretion response to light stimulus entrainment of circadian clock response to external stimulus photoperiodism response to radiation response to abiotic stimulus entrainment of circadian clock by photoperiod monosaccharide metabolic process carbohydrate metabolic process carbohydrate biosynthetic process hexose metabolic process monosaccharide biosynthetic process gluconeogenesis hexose biosynthetic process glucose metabolic process cell cycle regulation of cell cycle transcription by RNA polymerase II regulation of transcription by RNA polymerase II negative regulation of transcription by RNA polymerase II sensory organ development eye development animal organ development retina development in camera-type eye visual system development neural retina development camera-type eye development sensory system development import into cell cellular localization carboxylic acid transmembrane transport amino acid transmembrane transport amino acid neurotransmitter reuptake L-amino acid transport L-glutamate import regulation of L-glutamate import across plasma membrane establishment of localization in cell regulation of amino acid transport regulation of amino acid transmembrane transport neurotransmitter reuptake regulation of glutamate uptake involved in transmission of nerve impulse regulation of neurotransmitter uptake L-glutamate import across plasma membrane carboxylic acid transport regulation of neurotransmitter transport glutamate reuptake import across plasma membrane neurotransmitter transport transmembrane transport organic acid transport amino acid transport amine transport acidic amino acid transport regulation of amino acid import across plasma membrane regulation of transmembrane transport regulation of organic acid transport dicarboxylic acid transport L-alpha-amino acid transmembrane transport neurotransmitter uptake amino acid import across plasma membrane regulation of amine transport L-glutamate transmembrane transport glucan biosynthetic process polysaccharide biosynthetic process energy derivation by oxidation of organic compounds glycogen metabolic process generation of precursor metabolites and energy glycogen biosynthetic process polysaccharide metabolic process glucan metabolic process energy reserve metabolic process cellular component organization chromatin organization chromatin remodeling cellular component organization or biogenesis fat cell differentiation white fat cell differentiation	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytoplasm cytosol nucleoplasm perinuclear region of cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR013655	PAS fold 3	Domain
A	IPR022728	Period circadian-like, C-terminal	Domain
A	IPR050760	Period circadian regulator	Family
A	IPR000014	PAS domain	Domain
A	IPR057310	Period circadian protein homolog PER 1-3, bHLH-like domain	Domain
A	IPR048814	Period circadian protein homolog 1-3, PAS-A domain	Domain
A	IPR035965	PAS domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	: O15055	substance withdrawal syndrome chronic myelogenous leukemia, BCR-ABL1 positive advanced sleep phase syndrome 1 Advanced Sleep-Phase Syndrome, Familial invasive ductal breast carcinoma lung cancer psoriasis sleep-wake disorder atypical teratoid rhabdoid tumor breast carcinoma cutaneous lupus erythematosus depressive disorder endometriosis Kleine-Levin syndrome malignant colon neoplasm substance withdrawal syndrome chronic myelogenous leukemia, BCR-ABL1 positive advanced sleep phase syndrome 1 Advanced Sleep-Phase Syndrome, Familial invasive ductal breast carcinoma lung cancer psoriasis sleep-wake disorder atypical teratoid rhabdoid tumor breast carcinoma cutaneous lupus erythematosus depressive disorder endometriosis Kleine-Levin syndrome malignant colon neoplasm osteosarcoma seasonal affective disorder adenoma spina bifida bipolar disorder cystic fibrosis dermatomyositis glioblastoma large cell medulloblastoma ovarian cancer sinusitis subependymal giant cell astrocytoma astrocytic tumor breast cancer cocaine dependence

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.