MA_MAT3VR3010

Predicted interaction between CBX4 (1-560) and BCOR (1121-1320)

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Homo sapiens (Human) BCOR (Q6W2J9; 1121 - 1320)	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding histone deacetylase binding protein binding enzyme binding heat shock protein binding RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription corepressor activity DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding histone deacetylase binding protein binding enzyme binding heat shock protein binding RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription corepressor activity transcription regulator activity transcription coregulator activity transcription factor binding DNA-binding transcription factor binding	regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process negative regulation of DNA-templated transcription regulation of biological process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process negative regulation of RNA metabolic process developmental process heart development multicellular organism development multicellular organismal process anatomical structure development animal organ development circulatory system development system development specification of axis polarity pattern specification process axis specification chordate embryonic development embryo development in utero embryonic development hatching embryo development ending in birth or egg hatching blastocyst hatching organism emergence from protective structure blastocyst development anatomical structure morphogenesis odontogenesis animal organ morphogenesis transcription by RNA polymerase II regulation of transcription by RNA polymerase II negative regulation of transcription by RNA polymerase II regulation of multicellular organismal development regulation of developmental process tooth mineralization negative regulation of developmental process negative regulation of biomineral tissue development regulation of biomineral tissue development tissue development regulation of tooth mineralization negative regulation of tooth mineralization regulation of multicellular organismal process biomineral tissue development roof of mouth development regulation of bone mineralization negative regulation of bone mineralization ossification bone mineralization negative regulation of ossification negative regulation of multicellular organismal process regulation of ossification cellular component organization chromatin organization chromatin remodeling cellular component organization or biogenesis	membrane-bounded organelle protein-containing complex intracellular anatomical structure ubiquitin ligase complex catalytic complex nucleus nuclear protein-containing complex transferase complex intracellular membrane-bounded organelle intracellular organelle BCOR complex cellular anatomical structure nuclear ubiquitin ligase complex organelle membrane-bounded organelle protein-containing complex intracellular anatomical structure ubiquitin ligase complex catalytic complex nucleus nuclear protein-containing complex transferase complex intracellular membrane-bounded organelle intracellular organelle BCOR complex cellular anatomical structure nuclear ubiquitin ligase complex organelle intracellular protein-containing complex membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen
A	Homo sapiens (Human) CBX4 (O00257; 1 - 560)	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding phosphoprotein binding protein binding chromatin binding RNA binding single-stranded RNA binding aminoacyltransferase activity DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding phosphoprotein binding protein binding chromatin binding RNA binding single-stranded RNA binding aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity SUMO transferase activity transferase activity catalytic activity SUMO ligase activity ubiquitin-like protein ligase activity transcription corepressor activity transcription regulator activity transcription coregulator activity histone reader activity histone H3 reader activity chromatin-protein adaptor activity protein-macromolecule adaptor activity molecular adaptor activity histone H3K27me3 reader activity SUMO binding ubiquitin-like protein binding enzyme binding	regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process negative regulation of DNA-templated transcription regulation of biological process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process negative regulation of RNA metabolic process regulation of protein stability regulation of biological quality protein stabilization negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death cell death negative regulation of apoptotic process apoptotic process programmed cell death peptidyl-lysine modification protein sumoylation macromolecule modification peptidyl-amino acid modification protein metabolic process protein modification process post-translational protein modification protein modification by small protein conjugation protein modification by small protein conjugation or removal catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process macromolecule catabolic process regulation of ubiquitin-dependent protein catabolic process negative regulation of protein catabolic process modification-dependent macromolecule catabolic process negative regulation of protein metabolic process negative regulation of ubiquitin-dependent protein catabolic process negative regulation of catabolic process negative regulation of proteasomal ubiquitin-dependent protein catabolic process regulation of protein metabolic process proteasomal protein catabolic process protein catabolic process regulation of catabolic process regulation of proteasomal ubiquitin-dependent protein catabolic process modification-dependent protein catabolic process negative regulation of proteasomal protein catabolic process regulation of proteasomal protein catabolic process ubiquitin-dependent protein catabolic process regulation of protein catabolic process developmental process fat cell differentiation positive regulation of brown fat cell differentiation positive regulation of fat cell differentiation cellular developmental process regulation of developmental process positive regulation of biological process regulation of cell differentiation regulation of brown fat cell differentiation positive regulation of developmental process positive regulation of cell differentiation brown fat cell differentiation cell differentiation regulation of fat cell differentiation positive regulation of cellular process transcription by RNA polymerase II regulation of transcription by RNA polymerase II negative regulation of transcription by RNA polymerase II	membrane-bounded organelle intracellular organelle protein-containing complex cellular anatomical structure intracellular anatomical structure organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle PcG protein complex membrane-enclosed lumen intracellular membraneless organelle intracellular organelle lumen nuclear speck membrane-bounded organelle intracellular organelle protein-containing complex cellular anatomical structure intracellular anatomical structure organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle PcG protein complex membrane-enclosed lumen intracellular membraneless organelle intracellular organelle lumen nuclear speck ribonucleoprotein granule nuclear body nucleoplasm organelle lumen membraneless organelle supramolecular complex nuclear ribonucleoprotein granule nuclear lumen PRC1 complex ubiquitin ligase complex catalytic complex transferase complex nuclear ubiquitin ligase complex intracellular protein-containing complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR036770	Ankyrin repeat-containing domain superfamily	Homologous Superfamily
B	IPR038227	PCGF Ub-like fold discriminator superfamily	Homologous Superfamily
B	IPR002110	Ankyrin repeat	Repeat
B	IPR047144	BCL-6 corepressor-like	Family
B	IPR032365	BCL-6 corepressor, PCGF1 binding domain	Domain
B	IPR031628	BCL-6 corepressor, non-ankyrin-repeat domain	Domain
A	IPR023780	Chromo domain	Domain
A	IPR016197	Chromo-like domain superfamily	Homologous Superfamily
A	IPR033773	CBX family C-terminal motif	Conserved Site
A	IPR023779	Chromo domain, conserved site	Conserved Site
A	IPR000953	Chromo/chromo shadow domain	Domain
A	IPR043531	E3 SUMO-protein ligase CBX4	Family
A	IPR017984	Chromo domain subgroup	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B	: Q6W2J9	microphthalmia, syndromic 2 osteosarcoma microphthalmia microphthalmia, syndromic 1 clear cell sarcoma adenoid cystic carcinoma kidney Wilms tumor salivary gland adenoid cystic carcinoma malignant glioma ovarian cancer acute myeloid leukemia pancreatic intraductal papillary-mucinous neoplasm Bilateral Wilms Tumor psoriasis congenital anemia microphthalmia, syndromic 2 osteosarcoma microphthalmia microphthalmia, syndromic 1 clear cell sarcoma adenoid cystic carcinoma kidney Wilms tumor salivary gland adenoid cystic carcinoma malignant glioma ovarian cancer acute myeloid leukemia pancreatic intraductal papillary-mucinous neoplasm Bilateral Wilms Tumor psoriasis congenital anemia intellectual disability kidney neoplasm lung cancer microphthalmia, Lenz type non-small cell lung carcinoma pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia breast cancer retinoblastoma clear cell sarcoma of kidney invasive ductal breast carcinoma malignant ependymoma medulloblastoma pancreatic intraductal papillary-mucinous carcinoma atypical teratoid rhabdoid tumor primitive neuroectodermal tumor cataract coloboma tuberculosis glioblastoma kidney cancer large cell medulloblastoma
A	: O00257	attention deficit hyperactivity disorder, inattentive type breast carcinoma invasive ductal breast carcinoma medulloblastoma pancreatic intraductal papillary-mucinous neoplasm tuberculosis atypical teratoid rhabdoid tumor ductal breast carcinoma in situ juvenile dermatomyositis osteosarcoma primitive neuroectodermal tumor ulcerative colitis breast cancer glioblastoma large cell medulloblastoma attention deficit hyperactivity disorder, inattentive type breast carcinoma invasive ductal breast carcinoma medulloblastoma pancreatic intraductal papillary-mucinous neoplasm tuberculosis atypical teratoid rhabdoid tumor ductal breast carcinoma in situ juvenile dermatomyositis osteosarcoma primitive neuroectodermal tumor ulcerative colitis breast cancer glioblastoma large cell medulloblastoma ovarian cancer rheumatoid arthritis

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.