1BB6
LYSOZYME COMPLEX WITH 4-METHYL-UMBELLIFERYL CHITOTRIOSE
X-RAY DIFFRACTION
Crystallization
Crystalization Experiments | ||||
---|---|---|---|---|
ID | Method | pH | Temperature | Details |
1 | 10 | pH 10.0 |
Crystal Properties | |
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Matthews coefficient | Solvent content |
3.25 | 62 |
Crystal Data
Unit Cell | |
---|---|
Length ( Å ) | Angle ( ˚ ) |
a = 76.69 | α = 90 |
b = 76.69 | β = 90 |
c = 54.71 | γ = 120 |
Symmetry | |
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Space Group | P 31 2 1 |
Diffraction
Diffraction Experiment | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID # | Crystal ID | Scattering Type | Data Collection Temperature | Detector | Detector Type | Details | Collection Date | Monochromator | Protocol | |||||
1 | 1 | x-ray | 298 | DIFFRACTOMETER | ENRAF-NONIUS FAST | 1996-03-28 | M |
Radiation Source | |||||
---|---|---|---|---|---|
ID # | Source | Type | Wavelength List | Synchrotron Site | Beamline |
1 | ROTATING ANODE | ENRAF-NONIUS FR571 |
Data Collection
Overall | |||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID # | Resolution (High) | Resolution (Low) | Percent Possible (Observed) | R Merge I (Observed) | Net I Over Average Sigma (I) | Redundancy | Number Reflections (All) | Number Reflections (Observed) | Observed Criterion Sigma (F) | Observed Criterion Sigma (I) | B (Isotropic) From Wilson Plot | ||||||||
1 | 2 | 28 | 89.5 | 0.01 | 5.9 | 1.8 | 11445 | 1 |
Highest Resolution Shell | |||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID # | Resolution (High) | Resolution (Low) | Percent Possible (All) | Percent Possible (Observed) | Mean I Over Sigma (Observed) | Redundancy | Number Unique Reflections (All) | ||||||||||||
2 | 2.1 | 42.7 | 1.8 | 1.2 |
Refinement
Statistics | |||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Diffraction ID | Structure Solution Method | Cross Validation method | Resolution (High) | Resolution (Low) | Cut-off Sigma (F) | Number Reflections (Observed) | Number Reflections (R-Free) | Percent Reflections (Observed) | R-Work (Depositor) | R-Free (Depositor) | R-Free Selection Details | Mean Isotropic B | |||||||
X-RAY DIFFRACTION | PHASES FOR NATIVE STRUCTURE | THROUGHOUT | 2 | 8 | 1 | 11404 | 0.211 | 0.271 | RANDOM | 18.87 |
RMS Deviations | |
---|---|
Key | Refinement Restraint Deviation |
p_multtor_nbd | 0.188 |
p_singtor_nbd | 0.16 |
p_angle_d | 0.04 |
p_planar_d | 0.038 |
p_chiral_restr | 0.028 |
p_bond_d | 0.015 |
p_plane_restr | 0.009 |
p_angle_deg | |
p_hb_or_metal_coord | |
p_mcbond_it |
Non-Hydrogen Atoms Used in Refinement | |
---|---|
Non-Hydrogen Atoms | Number |
Protein Atoms | 999 |
Nucleic Acid Atoms | |
Solvent Atoms | 142 |
Heterogen Atoms | 55 |
Software
Software | |
---|---|
Software Name | Purpose |
MADNES | data collection |
SCALA | data scaling |
CCP4 | model building |
PROLSQ | refinement |
MADNES | data reduction |
CCP4 | data scaling |
CCP4 | phasing |