1DC2
SOLUTION NMR STRUCTURE OF TUMOR SUPPRESSOR P16INK4A, 20 STRUCTURES
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-SEPARATED_NOESY | 0.2-0.4 MM P16INK4A U-15N,13C; 4 MM HEPES, 1 MM DTT, 5 UM EDTA; 95% H2O, 5% D2O | 0 | 7.5 | AMBIENT | 293 | ||
2 | 4D_13C-SEPARATED_NOESY | 0.2-0.4 MM P16INK4A U-15N,13C; 4 MM HEPES, 1 MM DTT, 5 UM EDTA; 95% H2O, 5% D2O | 0 | 7.5 | AMBIENT | 293 | ||
3 | 4D_13C/15N-SEPARATED_NOESY | 0.2-0.4 MM P16INK4A U-15N,13C; 4 MM HEPES, 1 MM DTT, 5 UM EDTA; 95% H2O, 5% D2O | 0 | 7.5 | AMBIENT | 293 | ||
4 | 3D_15N-SEPARATED_NOESY | 0.2-0.4 MM P16INK4A U-15N; 4 MM HEPES, 1 MM DTT, 5 UM EDTA; 95% H2O, 5% D2O | 0 | 7.5 | AMBIENT | 293 | ||
5 | HNHA | 0.2-0.4 MM P16INK4A U-15N; 4 MM HEPES, 1 MM DTT, 5 UM EDTA; 95% H2O, 5% D2O | 0 | 7.5 | AMBIENT | 293 | ||
6 | 2D NOESY | 0.2-0.4 MM P16INK4A; 4 MM HEPES, 1 MM DTT, 5 UM EDTA; 95% H2O, 5% D2O | 0 | 7.5 | AMBIENT | 293 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 800 |
2 | Bruker | DMX | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | THE STRUCTURES ARE BASED ON A TOTAL OF 1439 RESTRAINTS, 1372 DISTANCE RESTRAINTS, 67 TORSION ANGLE RESTRAINTS. | X-PLOR |
NMR Ensemble Information | |
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Conformer Selection Criteria | THE CLOSEST TO MEAN STRUCTURE WHICH SHOWS GOOD AGREEMENT WITH THE EXPERIMENTAL RESTRAINTS |
Conformers Calculated Total Number | 60 |
Conformers Submitted Total Number | 20 |
Representative Model | 20 (minimized average structure) |
Additional NMR Experimental Information | |
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Details | THE STRUCTURE WAS DETERMINED USING TRIPLE RESONANCE NMR SPECTROSCOPY. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | X-PLOR | 3.85 | BRUNGER |
2 | collection | XwinNMR | 2.1 | BRUKER |
3 | processing | Felix | 95 | MOLECULAR SIMULATIONS INC. |
4 | processing | XwinNMR | 2.1 | BRUKER |
5 | refinement | X-PLOR | 3.85 | BRUNGER |