☰ Navigation Tabs
CRAMBIN MIXED SEQUENCE FORM AT 200 K. PROTEIN/WATER SUBSTATES
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1JXW 1JXW, CRAMBIN MIXED FORM AT 180 K.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7 293 ethanol, pH 7.00, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.4 30
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 40.87 α = 90 b = 18.48 β = 90.59 c = 22.37 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 200 DIFFRACTOMETER RIGAKU AFC-5R COLLIMATOR 1990-12-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 0.89 17.67 92.5 9.3 1 26625 26625 3.628
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 0.89 0.91 69 2.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION DIFFERENCE DENSITY PEAKS 1JXW, CRAMBIN MIXED FORM AT 180 K. 0.89 17.67 2 23417 92.5 0.136 0.136 0.136 0.2297 4.48
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 13 p_staggered_tor 9.5 p_planar_tor 4.9 p_multtor_nbd 0.159 p_singtor_nbd 0.15 p_scangle_it 0.14 p_scbond_it 0.135 p_xhyhbond_nbd 0.13 p_xyhbond_nbd 0.13 p_mcbond_it 0.116
Show All KeysRMS Deviations Key Refinement Restraint Deviation p_transverse_tor 13 p_staggered_tor 9.5 p_planar_tor 4.9 p_multtor_nbd 0.159 p_singtor_nbd 0.15 p_scangle_it 0.14 p_scbond_it 0.135 p_xhyhbond_nbd 0.13 p_xyhbond_nbd 0.13 p_mcbond_it 0.116 p_mcangle_it 0.116 p_chiral_restr 0.058 p_planar_d 0.056 p_angle_d 0.033 p_bond_d 0.012 p_plane_restr 0.009 p_hb_or_metal_coord 0.006 p_special_tor
Hide All KeysNon-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 341 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 3
Software Software Software Name Purpose LEHMANN-LARSEN data collection TEXSAN data reduction PROLSQ refinement LEHMANN-LARSEN data reduction TEXSAN data scaling