Find PDB structures and Computed Structure Models (CSM) by combining queries from tools in this suite: Attribute Search, Sequence Similarity, Sequence Motif, 3D Similarity, and 3D Motif with 'AND' logic.
NMR Structural Analysis of the Complex Formed Between alpha-Bungarotoxin and the Principal alpha-Neurotoxin Binding Sequence on the alpha7 Subunit of a Neuronal Nicotinic Acetylcholine Receptor
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Solvent
Ionic Strength
pH
Pressure
Temperature (K)
Spectrometer
1
2D NOESY
1.6 mM alpha-bungarotoxin/[U-15N]-alpha 7 19mer complex
30 mM sodium phosphate, pH 5.5
50 micromolar sodium azide
50 micromolar TMSP
95% H2O/5% D2O
5.5
ambient
308
2
2D TOCSY
1.6 mM alpha-bungarotoxin/[U-15N]-alpha 7 19mer complex
30 mM sodium phosphate, pH 5.5
50 micromolar sodium azide
50 micromolar TMSP
95% H2O/5% D2O
5.5
ambient
308
3
3D_15N-separated_NOESY
1.6 mM alpha-bungarotoxin/[U-15N]-alpha 7 19mer complex
30 mM sodium phosphate, pH 5.5
50 micromolar sodium azide
50 micromolar TMSP
95% H2O/5% D2O
5.5
ambient
308
4
3D_15N-separated_TOCSY
1.6 mM alpha-bungarotoxin/[U-15N]-alpha 7 19mer complex
30 mM sodium phosphate, pH 5.5
50 micromolar sodium azide
50 micromolar TMSP
95% H2O/5% D2O
5.5
ambient
308
5
2D 1H-15N HSQC
1.6 mM alpha-bungarotoxin/[U-15N]-alpha 7 19mer complex
30 mM sodium phosphate, pH 5.5
50 micromolar sodium azide
50 micromolar TMSP
95% H2O/5% D2O
5.5
ambient
308
6
HNHA
1.6 mM alpha-bungarotoxin/[U-15N]-alpha 7 19mer complex
30 mM sodium phosphate, pH 5.5
50 micromolar sodium azide
50 micromolar TMSP
95% H2O/5% D2O
5.5
ambient
308
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Bruker
AVANCE
600
2
Bruker
AVANCE
400
NMR Refinement
Method
Details
Software
distance geometry dynamical simulated annealing
RMS DEVIATIONS FROM IDEAL VALUES: BOND LENGTH(A) 0.0039, ANGLES(DEG) 0.61, IMPROPERS(DEG) 0.53
XwinNMR
NMR Ensemble Information
Conformer Selection Criteria
The submitted conformer models are the 10 with the lowest energy from a pool of over 100 accepted structures that had no restraint violations.
Conformers Calculated Total Number
Conformers Submitted Total Number
10
Representative Model
1 (determined by nmrclust 1.2)
Additional NMR Experimental Information
Details
THE WELL-DEFINED REGIONS IN THE COMPLEX, EXHIBITING EXTENSIVE LONG RANGE NOES, ARE: BGTX: 1-16, 22-28, 39-48, AND 54-68 ALPHA 7 19MER: 185-194