1LR1
Solution Structure of the Oligomerization Domain of the Bacterial Chromatin-Structuring Protein H-NS
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 15N labelled | 300 mM NaCl,20 mM potassium phosphate, 1 mM EDTA, at pH 7.0 | 300 mM NaCl | 7.0 | ambient | 298 | |
2 | 3D_13C-separated_NOESY | 15N,13C labelled | 300 mM NaCl,20 mM potassium phosphate, 1 mM EDTA, at pH 7.0 | 300 mM NaCl | 7.0 | ambient | 298 | |
3 | 3D 13CF1-filtered, F3-edited NOESY-HSQC | 14N,12C/15N,13C 1:1 mixed labelled chains | 300 mM NaCl,20 mM potassium phosphate, 1 mM EDTA, at pH 7.0 | 300 mM NaCl | 7.0 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UNITYPLUS | 500 |
2 | Varian | UNITYPLUS | 600 |
3 | Bruker | AVANCE | 800 |
NMR Refinement | ||
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Method | Details | Software |
dynamical simulated annealing | The calculations were carried out using the PARALLHDGv5.1 parameter, with the non-bonded energy function of PROLSQ, modified to allow floating stereochemistry of prochiral centers | Azara |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations, structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Additional NMR Experimental Information | |
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Details | Assignment was accomplished by using standard triple resonance techniques |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | Azara | 2.6 | Boucher, W. |
2 | data analysis | ANSIG | 3.3 | Kraulis, P. |
3 | structure solution | CNS | 1.1 | Brunger, A.T. |
4 | refinement | CNS | 1.1 | Brunger, A.T. |