1MX7
Two homologous rat cellular retinol-binding proteins differ in local structure and flexibility
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | 1.0mM ligand free cellular retinol-binding protein I U-[99% 15N, 99% 13C]; 20mM phosphate buffer, 50mM potassium chloride, 0.05% sudium azide, 5mM beta-mecaptoethanol-d6; 99.5% D2O | 99.5% D2O | 0.34 | 7.4 | ambient | 298 | |
2 | 3D_15N-separated_NOESY | 1.0mM ligand free cellular retinol-binding protein I U-[99% 15N]; 20mM phosphate buffer, 50mM potassium chloride, 0.05% sudium azide, 5mM beta-mecaptoethanol-d6; 95% H2O, 5% D2O | 95% H2O/5% D2O | 0.34 | 7.4 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 500 |
2 | Varian | INOVA | 600 |
3 | Varian | UNITYPLUS | 500 |
4 | Varian | UNITY | 600 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry simulated annealing | VNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 25 |
Conformers Submitted Total Number | 22 |
Representative Model | 1 (closest to the average) |
Additional NMR Experimental Information | |
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Details | Triple resonance experiments for the 1H, 15N and 13C resonance assignments included the following: HNCO CBCACONNH HNCACB CBCACOCAHA HCCH-TOCSY 15N-resolved TOCSY-HSQC |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | VNMR | 6.1 | varian associates |
2 | processing | VNMR | 6.1 | varian associates |
3 | data analysis | Felix | 2000 | molecular simulation inc. |
4 | structure solution | Tinker | 3.3 | Ponder, J.W. |
5 | refinement | Tinker | 3.3 | Ponder, J.W. |