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T. celer L30e R92A variant
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1H7M PDB ENTRY 1H7M
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 pH 7.50
Crystal Properties Matthews coefficient Solvent content 1.86 33.74
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 23.309 α = 90 b = 53.78 β = 110.48 c = 34.445 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX14.1 SRS PX14.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 32.28 99.8 0.04 23.3 3.5 7440
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.9 99.4 0.15 7.3 3.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1H7M 1.8 32.27 7075 343 99.8 0.192 0.19 0.2009 0.224 0.2389 RANDOM 15.18
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.39 -0.17 0.08 -0.59
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.304 r_dihedral_angle_3_deg 13.412 r_dihedral_angle_4_deg 9.586 r_dihedral_angle_1_deg 4.727 r_scangle_it 2.546 r_scbond_it 1.738 r_angle_refined_deg 1.064 r_mcangle_it 0.972 r_mcbond_it 0.953 r_angle_other_deg 0.71
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.304 r_dihedral_angle_3_deg 13.412 r_dihedral_angle_4_deg 9.586 r_dihedral_angle_1_deg 4.727 r_scangle_it 2.546 r_scbond_it 1.738 r_angle_refined_deg 1.064 r_mcangle_it 0.972 r_mcbond_it 0.953 r_angle_other_deg 0.71 r_symmetry_vdw_refined 0.305 r_symmetry_vdw_other 0.206 r_nbd_refined 0.199 r_nbtor_refined 0.177 r_nbd_other 0.163 r_xyhbond_nbd_refined 0.135 r_symmetry_hbond_refined 0.082 r_nbtor_other 0.081 r_chiral_restr 0.062 r_bond_refined_d 0.009 r_gen_planes_refined 0.003 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 747 Nucleic Acid Atoms Solvent Atoms 69 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling MOLREP phasing