2AFJ
SPRY domain-containing SOCS box protein 2 (SSB-2)
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 0.4mM U-15N | 10mM sodium phosphate, 50mM sodium chloride, 2mM EDTA, 0.02%(w/w) sodium azide, 95% H2O, 5% D2O | 7.0 | ambient | 295 | ||
2 | 3D_13C-separated_NOESY | 0.6mM U-15N, 13C | 10mM sodium phosphate, 50mM sodium chloride, 2mM EDTA, 0.02%(w/w) sodium azide, 95% H2O, 5% D2O | 7.0 | ambient | 295 | ||
3 | HNHA | 0.4mM U-15N | 10mM sodium phosphate, 50mM sodium chloride, 2mM EDTA, 0.02%(w/w) sodium azide, 95% H2O, 5% D2O | 7.0 | ambient | 295 | ||
4 | 2D NOESY | 0.4mM U-15N | 10mM sodium phosphate, 50mM sodium chloride, 2mM EDTA, 0.02%(w/w) sodium azide, 100% D2O | 7.0 | ambient | 295 | ||
5 | 2D NOESY | 0.4mM U-15N | 10mM sodium phosphate, 50mM sodium chloride, 2mM EDTA, 0.02%(w/w) sodium azide, 95% H2O, 5% D2O | 7.0 | ambient | 295 | ||
6 | 1H-15N HSQC | 0.4mM U-15N | 10mM sodium phosphate, 50mM sodium chloride, 2mM EDTA, 0.02%(w/w) sodium azide, 100% D2O | 7.0 | ambient | 295 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 500 |
2 | Bruker | DRX | 600 |
3 | Bruker | AVANCE | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics, simulated annealing | The structures are based on a total of 2074, 1738 are non-redundant NOE-derived distance constraints, 260 dihedral angle restraints, 76 distantce restraints from hydrogen bonds. | XwinNMR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with acceptable covalent geometry |
Conformers Calculated Total Number | 194 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average) |
Additional NMR Experimental Information | |
---|---|
Details | The structure was determined using triple-resonance NMR spectroscopy. Constrants for backbone Phi and Psi were also obtained from program TALOS using backbone chemical shifts. |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 3.5 | Bruker, Biospin |
2 | processing | XwinNMR | 3.5 | Bruker, Biospin |
3 | data analysis | XEASY | 1.3 | Bartels et al |
4 | structure solution | CYANA | 1.0.6 | Guntert et al |
5 | structure solution | X-PLOR | 2.9.3 | Schwieters |
6 | refinement | X-PLOR | 2.9.3 | Schwieters |