2ASQ
Solution Structure of SUMO-1 in Complex with a SUMO-binding Motif (SBM)
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | 1 mM 15N,13C-enriched PIASx-P peptide and unlabeled SUMO-1; 20mM phosphate buffer pH6.8; 92% H2O, 8% D2O, 17oC | 92% H2O, 8% D2O | |||||
2 | HNCA-J | 1 mM 15N,13C-enriched PIASx-P peptide and unlabeled SUMO-1; 20mM phosphate buffer pH6.8; 92% H2O, 8% D2O, 17oC | 92% H2O, 8% D2O | |||||
3 | 3D_13C-separated_NOESY | 1 mM 15N,13C-enriched SUMO-1 and unlabeled PIASx-P peptide; 20mM phosphate buffer pH6.8; 92% H2O, 8% D2O, 17oC | 92% H2O, 8% D2O | |||||
4 | HNCA-J | 1 mM 15N,13C-enriched SUMO-1 and unlabeled PIASx-P peptide; 20mM phosphate buffer pH6.8; 92% H2O, 8% D2O, 17oC | 92% H2O, 8% D2O | |||||
5 | HCCH-TOCSY | 1 mM 15N,13C-enriched PIASx-P peptide and unlabeled SUMO-1; 20mM phosphate buffer pH6.8; 92% H2O, 8% D2O, 17oC | 92% H2O, 8% D2O | |||||
6 | CC(co)NH | 1 mM 15N,13C-enriched SUMO-1 and unlabeled PIASx-P peptide; 20mM phosphate buffer pH6.8; 92% H2O, 8% D2O, 17oC | 92% H2O, 8% D2O |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | all calculated structures submitted |
Conformers Calculated Total Number | 10 |
Conformers Submitted Total Number | 10 |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 1.1 | Bruker |
2 | processing | NMRPipe | 1.1 | Delaglio, Frank |
3 | refinement | HADDOCK | 1.3 | Bonvin, Alexandre |
4 | data analysis | Felix | 2000 | Accelrys |
5 | data analysis | NMRView | 5 | One Moon Scientific |