X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP92980.1M Tris, 0.02M CaCl2, 20% PEG3350, 3% 1,6 Hexandiol, 3.3% sucrose, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.8356.54

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 141.375α = 90
b = 52.036β = 94.07
c = 58.97γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315mirrors2005-04-05MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-ID0.9798APS19-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1270.5399.510.05617.12.527833276942227.4
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
122.07970.3572.322.32840

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT270.532783327694148399.510.189240.187530.22124RANDOM27.373
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.73-0.41-0.46-0.32
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.88
r_dihedral_angle_4_deg19.481
r_dihedral_angle_3_deg14.698
r_dihedral_angle_1_deg6.12
r_scangle_it2.648
r_scbond_it1.656
r_angle_refined_deg1.172
r_mcangle_it0.995
r_mcbond_it0.591
r_nbtor_refined0.306
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.88
r_dihedral_angle_4_deg19.481
r_dihedral_angle_3_deg14.698
r_dihedral_angle_1_deg6.12
r_scangle_it2.648
r_scbond_it1.656
r_angle_refined_deg1.172
r_mcangle_it0.995
r_mcbond_it0.591
r_nbtor_refined0.306
r_symmetry_vdw_refined0.205
r_nbd_refined0.204
r_symmetry_hbond_refined0.185
r_xyhbond_nbd_refined0.157
r_chiral_restr0.083
r_bond_refined_d0.009
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2597
Nucleic Acid Atoms
Solvent Atoms301
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
SBC-Collectdata collection
HKL-2000data scaling