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HERA N-terminal domain in complex with orthophosphate, crystal form 1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7 295 14% PEG6000, 0.3M CaCl2, 0.1M Tris/HCl pH7.0, VAPOR DIFFUSION, SITTING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.1 41.33
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 78.554 α = 90 b = 53.655 β = 95.29 c = 44.671 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 140 IMAGE PLATE MAR scanner 345 mm plate mirrors 2006-04-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU 1.5419
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.66 50 96.1 0.071 25.1 7 21117 21117 21
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.66 1.72 64.4 0.382 2.3 2.8 1405
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.67 30.82 20042 1074 97.17 0.16914 0.16682 0.1806 0.20971 0.2168 RANDOM 21.508
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.11 0.5 -0.35 0.56
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.659 r_dihedral_angle_4_deg 15.78 r_dihedral_angle_3_deg 13.564 r_dihedral_angle_1_deg 5.222 r_scangle_it 3.463 r_scbond_it 2.162 r_angle_refined_deg 1.546 r_mcangle_it 1.49 r_angle_other_deg 0.963 r_mcbond_it 0.938
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.659 r_dihedral_angle_4_deg 15.78 r_dihedral_angle_3_deg 13.564 r_dihedral_angle_1_deg 5.222 r_scangle_it 3.463 r_scbond_it 2.162 r_angle_refined_deg 1.546 r_mcangle_it 1.49 r_angle_other_deg 0.963 r_mcbond_it 0.938 r_symmetry_vdw_other 0.262 r_mcbond_other 0.239 r_nbd_refined 0.216 r_nbd_other 0.202 r_xyhbond_nbd_refined 0.187 r_nbtor_refined 0.176 r_symmetry_vdw_refined 0.175 r_symmetry_hbond_refined 0.127 r_chiral_restr 0.093 r_nbtor_other 0.084 r_bond_refined_d 0.015 r_gen_planes_refined 0.007 r_gen_planes_other 0.002 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1746 Nucleic Acid Atoms Solvent Atoms 229 Heterogen Atoms 5
Software Software Software Name Purpose REFMAC refinement MAR345 data collection HKL-2000 data scaling COMO phasing