X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.529325% PEG MME 550, 0.01M zinc chloride, 0.1M MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.2144.25

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 64.109α = 90
b = 84.572β = 90
c = 108.279γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42006-07-17MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X4A0.97886NSLSX4A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.75097.9325683256812
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.71.7690.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.72013305930817164499.180.184330.181660.23475RANDOM27.058
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.282.24-0.96
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.089
r_dihedral_angle_3_deg16.754
r_dihedral_angle_4_deg11.908
r_dihedral_angle_1_deg6.888
r_scangle_it3.981
r_scbond_it2.9
r_angle_refined_deg1.81
r_mcangle_it1.655
r_mcbond_it1.091
r_symmetry_hbond_refined0.339
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.089
r_dihedral_angle_3_deg16.754
r_dihedral_angle_4_deg11.908
r_dihedral_angle_1_deg6.888
r_scangle_it3.981
r_scbond_it2.9
r_angle_refined_deg1.81
r_mcangle_it1.655
r_mcbond_it1.091
r_symmetry_hbond_refined0.339
r_nbtor_refined0.3
r_symmetry_vdw_refined0.259
r_nbd_refined0.232
r_xyhbond_nbd_refined0.211
r_chiral_restr0.139
r_metal_ion_refined0.096
r_bond_refined_d0.02
r_gen_planes_refined0.007
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2213
Nucleic Acid Atoms
Solvent Atoms385
Heterogen Atoms6

Software

Software
Software NamePurpose
REFMACrefinement
ADSCdata collection
HKL-2000data reduction
HKL-2000data scaling
PHASERphasing