2JOZ
Solution NMR structure of protein yxeF, Northeast Structural Genomics Consortium target Sr500a
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 4,3D, GFT HNNCABCA | 1 mM [U-100% 13C; U-100% 15N] entity | 95% H2O/5% D2O | 100mM | 6.5 | ambient | 298 | |
2 | 4,3D, GFT CABCACONNH | 1 mM [U-100% 13C; U-100% 15N] entity | 95% H2O/5% D2O | 100mM | 6.5 | ambient | 298 | |
3 | 4,3D, GFT HCCH COSY | 1 mM [U-100% 13C; U-100% 15N] entity | 95% H2O/5% D2O | 100mM | 6.5 | ambient | 298 | |
4 | 3D, 15N-13C RESOLVED SIMULTANIOUS NOESY | 1 mM [U-100% 13C; U-100% 15N] entity | 95% H2O/5% D2O | 100mM | 6.5 | ambient | 298 | |
5 | 3D HNCO | 1 mM [U-100% 13C; U-100% 15N] entity | 95% H2O/5% D2O | 100mM | 6.5 | ambient | 298 | |
6 | 1H-13C HSQC | 1 mM [U-10% 13C; U-100% 15N] entity | 95% H2O/5% D2O | 100mM | 6.5 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 750 |
2 | Varian | INOVA | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | CYANA |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (fewest violations) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | CYANA | 2.1 | Guntert, Mumenthaler and Wuthrich |
2 | processing | NMRPipe | 9.0 | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax |
3 | structure solution | AutoStructure | 1.0 | Huang, Swapana, Rajan, Ke, Xia, Shukla, Inouye and Montelione |
4 | refinement | CNS | 1.1 | Brunger, Adams, Clore, Gros, Nilges and Read |
5 | data analysis | XEASY | Bartels et al. | |
6 | peak picking | XEASY | Bartels et al. |