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CATHEPSIN L WITH A NITRILE INHIBITOR
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 0.1M MAGNESIUM FORMATE, 15 % PEG 3350
Crystal Properties Matthews coefficient Solvent content 1.95 37.1
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 45.997 α = 90 b = 57.504 β = 90 c = 75.708 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2011-03-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.14 50 99.8 0.05 13.14 6.26 73833 -3 17.63
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.14 1.24 99.6 0.49 2.32 5.81
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT NONE 1.14 45.79 67306 3627 95.97 0.14744 0.14546 0.1515 0.18362 0.19 RANDOM 23.29
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.07 -0.66 1.73
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 36.677 r_dihedral_angle_2_deg 33.83 r_sphericity_bonded 17.98 r_dihedral_angle_3_deg 12.125 r_dihedral_angle_4_deg 6.714 r_dihedral_angle_1_deg 5.634 r_rigid_bond_restr 2.573 r_angle_refined_deg 1.431 r_angle_other_deg 0.886 r_chiral_restr 0.081
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 36.677 r_dihedral_angle_2_deg 33.83 r_sphericity_bonded 17.98 r_dihedral_angle_3_deg 12.125 r_dihedral_angle_4_deg 6.714 r_dihedral_angle_1_deg 5.634 r_rigid_bond_restr 2.573 r_angle_refined_deg 1.431 r_angle_other_deg 0.886 r_chiral_restr 0.081 r_bond_other_d 0.011 r_bond_refined_d 0.01 r_gen_planes_refined 0.007 r_gen_planes_other 0.003 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_it r_mcbond_other r_mcangle_it r_mcangle_other r_scbond_it r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1688 Nucleic Acid Atoms Solvent Atoms 287 Heterogen Atoms 35
Software Software Software Name Purpose REFMAC refinement XDS data reduction SADABS data scaling REFMAC phasing