2F1Q
Solution structure of a DNA Holliday Junction
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 0.5mM DNA Holliday Junction | 6mM Co(NH3)6Cl3, 50 mM NaCl, 0.1 mM Na2EDTA | |||||
2 | 2D TOCSY | 0.5mM DNA Holliday Junction | 6mM Co(NH3)6Cl3, 50 mM NaCl, 0.1 mM Na2EDTA |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 600 |
2 | Bruker | DRX | 400 |
3 | Bruker | DRX | 500 |
4 | Bruker | DRX | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | X-PLOR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 13 |
Conformers Submitted Total Number | 13 |
Representative Model | 13 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | X-PLOR | 3.851 | Brunger |