2F1Q | pdb_00002f1q

Solution structure of a DNA Holliday Junction


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 13 
  • Conformers Submitted: 13 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation 3D Report Full Report

Validation slider image for 2F1Q

This is version 1.4 of the entry. See complete history

Literature

The solution structure of a four-way junction in the presence of cobalt ion

Wu, B.M van Buuren, B.N.Schleucher, J.Wijmenga, S.S.

To be published.

Macromolecule Content 

  • Total Structure Weight: 13.07 kDa 
  • Atom Count: 862 
  • Modeled Residue Count: 42 
  • Deposited Residue Count: 42 
  • Unique nucleic acid chains: 1

Macromolecules

Find similar nucleic acids by:  (by identity cutoff) 
Entity ID: 1
MoleculeChains LengthOrganismImage
42-MER42N/A
Sequence Annotations
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Reference Sequence

Small Molecules

Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
NCO

Query on NCO



Download:Ideal Coordinates CCD File
B [auth A]COBALT HEXAMMINE(III)
Co H18 N6
DYLMFCCYOUSRTK-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 13 
  • Conformers Submitted: 13 
  • Selection Criteria: structures with the lowest energy 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2007-03-20
    Type: Initial release
  • Version 1.1: 2008-05-01
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2022-03-09
    Changes: Database references, Derived calculations
  • Version 1.4: 2024-05-29
    Changes: Data collection