X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.529112% PEG 8000, 0.1M Hepes, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystal Properties
Matthews coefficientSolvent content
2.9658.49

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 88.967α = 90
b = 94.993β = 90
c = 181.404γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 4mirror2005-10-10MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSRS BEAMLINE PX14.20.9785SRSPX14.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.952099.90.1129.74.63318429786
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.953.0899.90.4442.12.9

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT2.95153105228040149390.030.250420.247570.30332RANDOM47.048
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.460.83-1.29
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.507
r_dihedral_angle_3_deg18.186
r_dihedral_angle_4_deg16.772
r_dihedral_angle_1_deg5.614
r_angle_refined_deg1.094
r_scangle_it0.659
r_scbond_it0.439
r_mcangle_it0.339
r_nbtor_refined0.304
r_mcbond_it0.216
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.507
r_dihedral_angle_3_deg18.186
r_dihedral_angle_4_deg16.772
r_dihedral_angle_1_deg5.614
r_angle_refined_deg1.094
r_scangle_it0.659
r_scbond_it0.439
r_mcangle_it0.339
r_nbtor_refined0.304
r_mcbond_it0.216
r_nbd_refined0.185
r_symmetry_vdw_refined0.137
r_symmetry_hbond_refined0.121
r_xyhbond_nbd_refined0.115
r_chiral_restr0.076
r_bond_refined_d0.006
r_gen_planes_refined0.002
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms7225
Nucleic Acid Atoms
Solvent Atoms148
Heterogen Atoms64

Software

Software
Software NamePurpose
REFMACrefinement
ADSCdata collection
DENZOdata reduction
SCALEPACKdata scaling
SOLVEphasing