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Atomic resolution crystal structure of the PPIase domain of human cyclophilin G
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8.5 28-32% PEG 4000 (W/V), 0.2M MGCL2, 0.1M TRIS PH 8.5
Crystal Properties Matthews coefficient Solvent content 1.93 36.1
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 37.544 α = 90 b = 65.144 β = 90 c = 69.68 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH COLLIMATOR M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MPG/DESY, HAMBURG BEAMLINE BW6 MPG/DESY, HAMBURG BW6
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 0.75 20 93.5 0.06 17.4 7.15 206194 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 0.75 0.76 79.1 0.52 1.68
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION DIRECT METHODS FREE R-VALUE NONE 0.75 10 194300 10239 89.1 0.107 0.107 0.124 0.1167 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 30 1274.41 1695.52
RMS Deviations Key Refinement Restraint Deviation s_non_zero_chiral_vol 0.173 s_approx_iso_adps 0.114 s_zero_chiral_vol 0.099 s_anti_bump_dis_restr 0.092 s_similar_adp_cmpnt 0.05 s_angle_d 0.039 s_from_restr_planes 0.031 s_bond_d 0.02 s_rigid_bond_adp_cmpnt 0.006 s_similar_dist
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1350 Nucleic Acid Atoms Solvent Atoms 432 Heterogen Atoms 2
Software Software Software Name Purpose SHELXL-97 refinement DENZO data reduction SCALEPACK data scaling SHELX phasing