X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION6.529120% w/v PEG3350, 0.2 M sodium citrate, 0.1 M Bis-tris propane, pH 6.5, VAPOR DIFFUSION, temperature 291K
Crystal Properties
Matthews coefficientSolvent content
2.6253.08

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 93.68α = 90
b = 84.59β = 90.03
c = 126.28γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 6Mmirrors2011-02-25MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMOND BEAMLINE I030.9778DiamondI03

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.71263.1499.40.08511.14.15347753477
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.7122.7899.40.7060.70614.23894

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.71263.145346027151000.20460.20120.2691RANDOM60.0573
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.49-0.353.66-3.17
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg22.352
r_dihedral_angle_3_deg10.932
r_dihedral_angle_4_deg10.503
r_scangle_it8.027
r_scbond_it5.463
r_mcangle_it3.801
r_dihedral_angle_1_deg2.474
r_mcbond_it2.158
r_angle_refined_deg1.244
r_angle_other_deg0.744
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg22.352
r_dihedral_angle_3_deg10.932
r_dihedral_angle_4_deg10.503
r_scangle_it8.027
r_scbond_it5.463
r_mcangle_it3.801
r_dihedral_angle_1_deg2.474
r_mcbond_it2.158
r_angle_refined_deg1.244
r_angle_other_deg0.744
r_mcbond_other0.472
r_chiral_restr0.09
r_bond_refined_d0.014
r_gen_planes_refined0.002
r_bond_other_d0.001
r_gen_planes_other
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms13430
Nucleic Acid Atoms
Solvent Atoms90
Heterogen Atoms21

Software

Software
Software NamePurpose
SCALAdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction
GDAdata collection
xia2data reduction
PHASERphasing