X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP729313-18% P3350, 15-75mM CaCl2, 4% Isopropanol and 0.1M HEPES pH 7.5 , VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.0540.1

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 35.762α = 90
b = 156.878β = 102.4
c = 49.334γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray200CCDADSC QUANTUM 315MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU FR-E+ SUPERBRIGHT1.5418

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.83156.878903568922
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
122.0592.56

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2156.87831364158787.80.20490.20470.20070.2811RANDOM30.3236
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.1-0.02-0.09-0.01
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.078
r_dihedral_angle_4_deg17.151
r_dihedral_angle_3_deg16.822
r_dihedral_angle_1_deg6.249
r_scangle_it3.32
r_scbond_it2.018
r_angle_refined_deg1.433
r_mcangle_it1.261
r_angle_other_deg0.899
r_mcbond_it0.69
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.078
r_dihedral_angle_4_deg17.151
r_dihedral_angle_3_deg16.822
r_dihedral_angle_1_deg6.249
r_scangle_it3.32
r_scbond_it2.018
r_angle_refined_deg1.433
r_mcangle_it1.261
r_angle_other_deg0.899
r_mcbond_it0.69
r_mcbond_other0.143
r_chiral_restr0.082
r_bond_refined_d0.013
r_gen_planes_refined0.005
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4448
Nucleic Acid Atoms
Solvent Atoms301
Heterogen Atoms66

Software

Software
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction
ADSCdata collection
HKL-2000data reduction
SCALAdata scaling
AMoREphasing