8QER

Pseudomonas aeruginosa FabF C164A in complex with 4-(1H-pyrazole-3-carbonylamino)pentanoic acid

X-RAY DIFFRACTION

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Starting Model(s)

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	Other		in-house determined apo structure

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP		298	0.24M ammonium formate and 35% PEG3350

Crystal Properties
Matthews coefficient	Solvent content
2.09	41.11

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 100.322	α = 90
b = 103.969	β = 90
c = 140.729	γ = 90

Symmetry
Space Group	C 2 2 21

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS3 2M		2022-07-10	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	ESRF BEAMLINE MASSIF-1	0.9655	ESRF	MASSIF-1

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.95	48.764	100	0.996	8.1	6.4		53820

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.95	2.02	100		0.555		6.3

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	1.95	48.764	53783	2690	99.892	0.189	0.1863	0.2459	38.98

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-2.329			0.13		2.199

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_6_deg	15.951
r_dihedral_angle_3_deg	15.03
r_dihedral_angle_2_deg	12.411
r_dihedral_angle_1_deg	7.116
r_lrange_it	7.033
r_lrange_other	7.012
r_scangle_it	6.012
r_scangle_other	6.012
r_scbond_it	4.428
r_scbond_other	4.427
r_mcangle_it	4.318
r_mcangle_other	4.318
r_mcbond_it	3.419
r_mcbond_other	3.419
r_angle_refined_deg	1.684
r_angle_other_deg	0.667
r_nbd_refined	0.197
r_nbtor_refined	0.165
r_symmetry_nbd_other	0.164
r_symmetry_xyhbond_nbd_refined	0.158
r_xyhbond_nbd_refined	0.149
r_nbd_other	0.109
r_symmetry_nbd_refined	0.093
r_chiral_restr	0.088
r_symmetry_nbtor_other	0.076
r_ncsr_local_group_1	0.076
r_bond_refined_d	0.01
r_gen_planes_refined	0.01
r_bond_other_d	0.003
r_gen_planes_other	0.003

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	6083
Nucleic Acid Atoms
Solvent Atoms	205
Heterogen Atoms	88

Software

Software
Software Name	Purpose
REFMAC	refinement
XDS	data reduction
Aimless	data scaling
PHASER	phasing