ADP: ADENOSINE-5'-DIPHOSPHATE

ADP is a Ligand Of Interest in 1KDN designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1KDN_ADP_C_158Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1KDN_ADP_C_158Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1KDN_ADP_C_158Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
1KDN_ADP_C_158 95% 29% 0.073 0.9781.37 1.45 6 300100%1
1KDN_ADP_A_158 95% 23% 0.073 0.9771.72 1.45 5 300100%1
1KDN_ADP_B_158 91% 21% 0.083 0.971.52 1.79 5 400100%1
2BEF_ADP_A_158 95% 18% 0.072 0.9781.82 1.69 5 700100%1
3KB1_ADP_A_301 100% 22% 0.021 0.9962.06 1.21 6 410100%1
5GZA_ADP_A_401 100% 2% 0.019 0.9973.36 3.39 13 1110100%1
5KHW_ADP_A_1201 100% 41% 0.023 0.9951.1 1.2 1 200100%1
8VZA_ADP_A_603 100% 37% 0.024 0.9950.96 1.51 1 500100%1
1PHP_ADP_A_396 100% 24% 0.026 0.9951.29 1.8 3 1110100%1