Ligand validation:1NKH

UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 1NKH designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
1NKH_UDP_D_810	99%	21%	0.044	0.978	1.83	1.47	4	7	3	0	100%	1
1NKH_UDP_B_809	98%	21%	0.053	0.972	1.81	1.53	4	7	1	0	100%	1
1NKH_UDP_B_811	34%	22%	0.123	0.802	1.78	1.47	3	6	2	0	100%	1
1NKH_UDP_D_812	27%	23%	0.123	0.768	1.71	1.47	4	7	0	0	100%	1
2FYD_UDP_D_528	83%	20%	0.102	0.962	1.55	1.79	4	11	2	0	100%	1
1PZY_UDP_B_407	46%	37%	0.162	0.897	1.33	1.15	3	2	1	0	100%	0.952
1NHE_UDP_D_810	32%	14%	0.147	0.821	2.52	1.41	4	8	5	0	100%	1
2FYC_UDP_B_405	21%	32%	0.189	0.8	1.21	1.47	2	8	0	0	100%	1
1O23_UDP_B_811	8%	31%	0.262	0.74	1.26	1.47	2	7	1	0	100%	1
8X3Q_UDP_C_401	100%	3%	0.015	0.998	3.32	2.69	13	13	0	0	100%	1
8X3U_UDP_B_401	100%	3%	0.012	0.999	3.31	2.68	13	13	2	0	100%	1
8VH8_UDP_C_704	100%	62%	0.032	0.995	0.55	0.9	-	1	0	0	100%	1
4GYW_UDP_C_1101	100%	37%	0.037	0.988	1.03	1.45	2	4	0	0	100%	1
2IV7_UDP_A_1372	100%	40%	0.035	0.984	0.85	1.49	-	4	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.